Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CLSTN3-207ENST00000537408 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AL353625.1-201ENST00000569097 3131 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AL162274.3-201ENST00000623138 3109 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 HIST1H3J-201ENST00000359303 411 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 Y_RNA.96-201ENST00000363092 109 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 SNORA65-201ENST00000364432 130 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AL354979.1-201ENST00000369027 266 ntTSL 3 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 RBMX2-202ENST00000370947 798 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 SNORA18.3-201ENST00000384122 132 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 RNY1P6-201ENST00000384193 109 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 MIR647-201ENST00000384823 96 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 IGLV4-60-201ENST00000390284 362 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 SNORA26-201ENST00000391286 122 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AL357515.1-201ENST00000402967 542 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 MIR1912-201ENST00000410389 80 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 RN7SKP27-201ENST00000410684 333 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC01044-201ENST00000413637 657 ntTSL 3 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 GAPDHP65-201ENST00000425487 1006 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC009414.1-201ENST00000427200 443 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 MTND6P12-201ENST00000428247 522 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 CHCHD4P4-201ENST00000437690 327 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AL138899.2-201ENST00000439139 499 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 SLC25A5P3-201ENST00000444439 885 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 CYCSP44-201ENST00000448560 313 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AP000705.1-201ENST00000454567 350 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC108161.1-201ENST00000461060 402 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC096922.1-201ENST00000461635 651 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 RPS23P7-201ENST00000466210 444 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AL049874.1-201ENST00000489560 388 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 SNORA43.2-201ENST00000516652 128 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 IGLV3-2-201ENST00000519345 229 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 SFTPC-206ENST00000522109 921 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC107016.1-201ENST00000550463 337 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC136944.3-202ENST00000567422 509 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 APOC1P1-202ENST00000571466 253 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC127496.2-201ENST00000576859 368 ntTSL 3 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 TRIM16-214ENST00000579219 999 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC069061.1-201ENST00000580677 397 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 MIR4668-201ENST00000582284 70 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 CIAPIN1P-201ENST00000584883 931 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 RASGRP4-202ENST00000426920 2650 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 RASGRP4-220ENST00000622174 2651 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 ITGA6-206ENST00000442250 3393 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 PIPSL-201ENST00000480546 3350 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 MGAT5B-203ENST00000428789 4053 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AL080317.3-201ENST00000607434 4315 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 FAR1-201ENST00000354817 5264 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 TP63-211ENST00000449992 1506 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AC079331.2-201ENST00000623462 2546 ntBASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 PCDHGC3-201ENST00000308177 4725 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF418-202ENST00000425570 3547 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 CLDN19-203ENST00000539749 3517 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 GNE-206ENST00000543356 2576 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LMOD1-202ENST00000616739 3058 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 THY1-201ENST00000284240 3556 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 TLR9-201ENST00000360658 3870 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 NACA-216ENST00000550952 2922 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 GNAT1-201ENST00000232461 2417 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 FAM181A-AS1-202ENST00000554742 2402 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 RD3-201ENST00000367002 4266 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AC138749.1-201ENST00000567652 2472 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 NLRP12-202ENST00000345770 3547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 TXNDC15-201ENST00000358387 3548 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms