RNA–Protein interactions for RNA: ENST00000356247.4

AC004057.1-202, humanhuman

TSL 3 BASIC

Gene AC004057.1, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004057.1-202ENST00000356247 CHIC1Q5VXU3 224 aa12.73□□□□□ -0.37
AC004057.1-202ENST00000356247 AEBP2Q6ZN18 517 aaPredicted RBP12.54□□□□□ -0.4
AC004057.1-202ENST00000356247 PHF23Q9BUL5 403 aaPredicted RBP11.13□□□□□ -0.63
AC004057.1-202ENST00000356247 SENP3Q9H4L4 574 aaPredicted RBP10.77□□□□□ -0.69
AC004057.1-202ENST00000356247 PLPPR3Q6T4P5 718 aa10.58□□□□□ -0.72
AC004057.1-202ENST00000356247 FOXD1Q16676 465 aa9.83□□□□□ -0.84
AC004057.1-202ENST00000356247 ADRA2BP18089 450 aa9.76□□□□□ -0.85
AC004057.1-202ENST00000356247 PPP6R1Q9UPN7 881 aa9.69□□□□□ -0.86
AC004057.1-202ENST00000356247 KCNA4P22459 653 aa9.47□□□□□ -0.89
AC004057.1-202ENST00000356247 PIAS4Q8N2W9 510 aaPredicted RBP9.45□□□□□ -0.9
AC004057.1-202ENST00000356247 PPP4R3CPQ6ZMV5 832 aa9.32□□□□□ -0.92
AC004057.1-202ENST00000356247 NCBP3Q53F19 620 aaKnown RBP9.31□□□□□ -0.92
AC004057.1-202ENST00000356247 EHMT2Q96KQ7 1210 aa9.31□□□□□ -0.92
AC004057.1-202ENST00000356247 SLC4A1APQ9BWU0 796 aaKnown RBP9.17□□□□□ -0.94
AC004057.1-202ENST00000356247 SCAF1Q9H7N4 1312 aaKnown RBP9.13□□□□□ -0.95
AC004057.1-202ENST00000356247 MSH5O43196 834 aa9.06□□□□□ -0.96
AC004057.1-202ENST00000356247 NPM3O75607 178 aaKnown RBP9.02□□□□□ -0.97
AC004057.1-202ENST00000356247 CNKSR2Q8WXI2 1034 aa9.02□□□□□ -0.97
AC004057.1-202ENST00000356247 CSRNP3Q8WYN3 585 aa8.96□□□□□ -0.98
AC004057.1-202ENST00000356247 POTEDQ86YR6 584 aa8.8□□□□□ -1
AC004057.1-202ENST00000356247 RNF216Q9NWF9 866 aaPredicted RBP8.73□□□□□ -1.01
AC004057.1-202ENST00000356247 MAPK8IP2Q13387 824 aaPredicted RBP8.72□□□□□ -1.01
AC004057.1-202ENST00000356247 FOXD4L1Q9NU39 408 aa8.7□□□□□ -1.02
AC004057.1-202ENST00000356247 DNAJC5BQ9UF47 199 aa8.7□□□□□ -1.02
AC004057.1-202ENST00000356247 ZBTB22O15209 634 aa8.62□□□□□ -1.03
AC004057.1-202ENST00000356247 DMRT2Q9Y5R5 561 aa8.6□□□□□ -1.03
AC004057.1-202ENST00000356247 HOXD11P31277 338 aaPredicted RBP8.55□□□□□ -1.04
AC004057.1-202ENST00000356247 MYT1Q01538 1121 aa8.53□□□□□ -1.04
AC004057.1-202ENST00000356247 MYCNP04198 464 aaPredicted RBP8.41□□□□□ -1.06
AC004057.1-202ENST00000356247 PELP1Q8IZL8 1130 aaKnown RBP8.41□□□□□ -1.06
AC004057.1-202ENST00000356247 ATXN8OSP0DMR3 200 aa8.39□□□□□ -1.07
AC004057.1-202ENST00000356247 TTBK1Q5TCY1 1321 aaPredicted RBP8.36□□□□□ -1.07
AC004057.1-202ENST00000356247 SLC4A2P04920 1241 aa8.36□□□□□ -1.07
AC004057.1-202ENST00000356247 DCAF8L1A6NGE4 600 aa8.31□□□□□ -1.08
AC004057.1-202ENST00000356247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.27□□□□□ -1.09
AC004057.1-202ENST00000356247 HNRNPUL2Q1KMD3 747 aaKnown RBP8.27□□□□□ -1.09
AC004057.1-202ENST00000356247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.26□□□□□ -1.09
AC004057.1-202ENST00000356247 SAMD1Q6SPF0 538 aaPredicted RBP8.2□□□□□ -1.1
AC004057.1-202ENST00000356247 SLC24A1O60721 1099 aa8.16□□□□□ -1.1
AC004057.1-202ENST00000356247 FKBP8Q14318 412 aa8.16□□□□□ -1.1
AC004057.1-202ENST00000356247 AMER1Q5JTC6 1135 aaPredicted RBP8.16□□□□□ -1.1
AC004057.1-202ENST00000356247 APLP2Q06481 763 aa8.14□□□□□ -1.11
AC004057.1-202ENST00000356247 U3KPZ7 1027 aaPredicted RBP8.04□□□□□ -1.12
AC004057.1-202ENST00000356247 RTN4Q9NQC3 1192 aaKnown RBP8□□□□□ -1.13
AC004057.1-202ENST00000356247 ATF5Q9Y2D1 282 aaPredicted RBP7.99□□□□□ -1.13
AC004057.1-202ENST00000356247 ZNF219Q9P2Y4 722 aaPredicted RBP7.95□□□□□ -1.14
AC004057.1-202ENST00000356247 FBXO3Q9UK99 471 aa7.89□□□□□ -1.15
AC004057.1-202ENST00000356247 ERICH6Q7L0X2 663 aa7.88□□□□□ -1.15
AC004057.1-202ENST00000356247 FBLN2P98095 1184 aa7.87□□□□□ -1.15
AC004057.1-202ENST00000356247 SPDYE4A6NLX3 237 aa7.82□□□□□ -1.16
AC004057.1-202ENST00000356247 TRHP20396 242 aaPredicted RBP7.8□□□□□ -1.16
AC004057.1-202ENST00000356247 CAPN15O75808 1086 aa7.77□□□□□ -1.17
AC004057.1-202ENST00000356247 DAXXQ9UER7 740 aaPredicted RBP7.76□□□□□ -1.17
AC004057.1-202ENST00000356247 ZBTB12Q9Y330 459 aaPredicted RBP7.75□□□□□ -1.17
AC004057.1-202ENST00000356247 CACNB1Q02641 598 aaPredicted RBP7.74□□□□□ -1.17
AC004057.1-202ENST00000356247 POLA2Q14181 598 aa7.73□□□□□ -1.17
AC004057.1-202ENST00000356247 C1QBPQ07021 282 aaKnown RBP7.72□□□□□ -1.17
AC004057.1-202ENST00000356247 RNF39Q9H2S5 420 aa7.7□□□□□ -1.18
AC004057.1-202ENST00000356247 SPINK5Q9NQ38 1064 aaPredicted RBP7.69□□□□□ -1.18
AC004057.1-202ENST00000356247 MKRN4PQ13434 485 aaPredicted RBP7.68□□□□□ -1.18
AC004057.1-202ENST00000356247 VASPP50552 380 aaPredicted RBP7.65□□□□□ -1.18
AC004057.1-202ENST00000356247 PROM2Q8N271 834 aa7.64□□□□□ -1.19
AC004057.1-202ENST00000356247 ABCB7O75027 752 aa7.58□□□□□ -1.2
AC004057.1-202ENST00000356247 DCAF8L2P0C7V8 631 aa7.56□□□□□ -1.2
AC004057.1-202ENST00000356247 PRKCSHP14314 528 aaPredicted RBP7.54□□□□□ -1.2
AC004057.1-202ENST00000356247 KLHL34Q8N239 644 aa7.54□□□□□ -1.2
AC004057.1-202ENST00000356247 ZNF692Q9BU19 519 aaPredicted RBP7.54□□□□□ -1.2
AC004057.1-202ENST00000356247 STAG3Q9UJ98 1225 aa7.54□□□□□ -1.2
AC004057.1-202ENST00000356247 IFNLR1Q8IU57 520 aaPredicted RBP7.51□□□□□ -1.21
AC004057.1-202ENST00000356247 SPDYE2BA6NHP3 402 aa7.5□□□□□ -1.21
AC004057.1-202ENST00000356247 SPDYE6P0CI01 402 aa7.5□□□□□ -1.21
AC004057.1-202ENST00000356247 SPDYE2Q495Y8 402 aa7.5□□□□□ -1.21
AC004057.1-202ENST00000356247 PLEKHG5O94827 1062 aa7.49□□□□□ -1.21
AC004057.1-202ENST00000356247 SPOCK2Q92563 424 aa7.48□□□□□ -1.21
AC004057.1-202ENST00000356247 PLCB2Q00722 1185 aa7.47□□□□□ -1.21
AC004057.1-202ENST00000356247 PLCD3Q8N3E9 789 aa7.47□□□□□ -1.21
AC004057.1-202ENST00000356247 DSG3P32926 999 aa7.46□□□□□ -1.22
AC004057.1-202ENST00000356247 ZBTB47Q9UFB7 747 aaPredicted RBP7.43□□□□□ -1.22
AC004057.1-202ENST00000356247 OSCARQ8IYS5 282 aa7.42□□□□□ -1.22
AC004057.1-202ENST00000356247 MIER1Q8N108 512 aa7.42□□□□□ -1.22
AC004057.1-202ENST00000356247 HAP1P54257 671 aaPredicted RBP7.41□□□□□ -1.22
AC004057.1-202ENST00000356247 PABPN1Q86U42 306 aaKnown RBP eCLIP7.41□□□□□ -1.22
AC004057.1-202ENST00000356247 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.41□□□□□ -1.22
AC004057.1-202ENST00000356247 SSUH2Q9Y2M2 353 aa7.41□□□□□ -1.22
AC004057.1-202ENST00000356247 ECM2O94769 699 aaPredicted RBP7.4□□□□□ -1.22
AC004057.1-202ENST00000356247 PKD2Q13563 968 aa7.39□□□□□ -1.23
AC004057.1-202ENST00000356247 BBXQ8WY36 941 aaPredicted RBP7.33□□□□□ -1.24
AC004057.1-202ENST00000356247 VSIG10Q8N0Z9 540 aa7.31□□□□□ -1.24
AC004057.1-202ENST00000356247 TRIM41Q8WV44 630 aa7.31□□□□□ -1.24
AC004057.1-202ENST00000356247 CIZ1Q9ULV3 898 aaPredicted RBP7.31□□□□□ -1.24
AC004057.1-202ENST00000356247 BCANQ96GW7 911 aa7.27□□□□□ -1.25
AC004057.1-202ENST00000356247 CFAP44Q96MT7 982 aa7.26□□□□□ -1.25
AC004057.1-202ENST00000356247 TAOK2Q9UL54 1235 aa7.26□□□□□ -1.25
AC004057.1-202ENST00000356247 GSE1Q14687 1217 aa7.25□□□□□ -1.25
AC004057.1-202ENST00000356247 PAXIP1Q6ZW49 1069 aaPredicted RBP7.25□□□□□ -1.25
AC004057.1-202ENST00000356247 ARXQ96QS3 562 aa7.25□□□□□ -1.25
AC004057.1-202ENST00000356247 SPRYD3Q8NCJ5 442 aa7.24□□□□□ -1.25
AC004057.1-202ENST00000356247 RBM42Q9BTD8 480 aaKnown RBP7.24□□□□□ -1.25
AC004057.1-202ENST00000356247 EIF5BO60841 1220 aaKnown RBP7.23□□□□□ -1.25
AC004057.1-202ENST00000356247 RANGAP1P46060 587 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms