Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PWAR5-201ENST00000624480 3180 ntBASIC8.15□□□□□ -1.11
LRCH3Q96II8 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LRCH3Q96II8 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LRCH3Q96II8 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LRCH3Q96II8 XRCC6P2-201ENST00000457831 1822 ntBASIC8.15□□□□□ -1.11
LRCH3Q96II8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.15□□□□□ -1.11
LRCH3Q96II8 AC012360.3-201ENST00000610036 3449 ntBASIC8.15□□□□□ -1.11
LRCH3Q96II8 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC007126.1-201ENST00000508202 4781 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC008267.5-201ENST00000424928 265 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 SKP1P3-201ENST00000429280 487 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 CACYBPP1-201ENST00000438592 684 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 RPL23AP16-201ENST00000441715 421 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 HMGN1P2-201ENST00000445197 310 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AL161454.1-201ENST00000446226 569 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 MED28P7-201ENST00000456611 530 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 RNU6-261P-201ENST00000459506 102 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 RPS3P7-201ENST00000488662 726 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC079768.1-201ENST00000503181 711 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC138409.2-202ENST00000507274 458 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 NACAP6-201ENST00000509572 622 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC233724.10-201ENST00000510454 409 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC095059.2-201ENST00000510601 933 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 RNU6-416P-201ENST00000516265 103 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 SCARNA18.2-201ENST00000516882 84 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 SNORA25.17-201ENST00000517184 124 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC021001.1-201ENST00000518703 987 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 PSMA2P1-201ENST00000526365 646 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 PTP4A1P6-201ENST00000531034 478 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC013828.2-201ENST00000532487 235 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 OR5BK1P-201ENST00000550421 823 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC090510.2-201ENST00000617465 629 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 AL356585.10-201ENST00000641883 123 ntBASIC8.14□□□□□ -1.11
LRCH3Q96II8 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
LRCH3Q96II8 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LRCH3Q96II8 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 RNU6-223P-201ENST00000362830 107 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 RNA5SP114-201ENST00000363780 113 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC117470.1-201ENST00000381974 330 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 Y_RNA.557-201ENST00000384680 107 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 U3.23-201ENST00000391132 200 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 RPS4XP8-201ENST00000402039 771 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 RN7SKP127-201ENST00000410443 354 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 MTND4LP17-201ENST00000414607 293 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC115283.1-201ENST00000427353 400 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 RPS27AP6-201ENST00000427962 448 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC015983.1-201ENST00000441577 373 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms