RNA–Protein interactions for RNA: ENST00000516265.1

RNU6-416P-201, Transcript of RNA, U6 small nuclear 416, pseudogene, humanhuman

BASIC

Gene RNU6-416P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-416P-201ENST00000516265 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
RNU6-416P-201ENST00000516265 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
RNU6-416P-201ENST00000516265 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
RNU6-416P-201ENST00000516265 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
RNU6-416P-201ENST00000516265 PLPPR3Q6T4P5 718 aa15.05■□□□□ -0
RNU6-416P-201ENST00000516265 FOXD1Q16676 465 aa14.17□□□□□ -0.14
RNU6-416P-201ENST00000516265 ADRA2BP18089 450 aa14.04□□□□□ -0.16
RNU6-416P-201ENST00000516265 PPP6R1Q9UPN7 881 aa13.98□□□□□ -0.17
RNU6-416P-201ENST00000516265 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
RNU6-416P-201ENST00000516265 KCNA4P22459 653 aa13.5□□□□□ -0.25
RNU6-416P-201ENST00000516265 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
RNU6-416P-201ENST00000516265 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
RNU6-416P-201ENST00000516265 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
RNU6-416P-201ENST00000516265 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
RNU6-416P-201ENST00000516265 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
RNU6-416P-201ENST00000516265 MSH5O43196 834 aa12.94□□□□□ -0.34
RNU6-416P-201ENST00000516265 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
RNU6-416P-201ENST00000516265 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
RNU6-416P-201ENST00000516265 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
RNU6-416P-201ENST00000516265 MAPK8IP2Q13387 824 aaPredicted RBP12.58□□□□□ -0.4
RNU6-416P-201ENST00000516265 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
RNU6-416P-201ENST00000516265 ZBTB22O15209 634 aa12.38□□□□□ -0.43
RNU6-416P-201ENST00000516265 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
RNU6-416P-201ENST00000516265 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
RNU6-416P-201ENST00000516265 DMRT2Q9Y5R5 561 aa12.31□□□□□ -0.44
RNU6-416P-201ENST00000516265 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
RNU6-416P-201ENST00000516265 SLC4A2P04920 1241 aa12□□□□□ -0.49
RNU6-416P-201ENST00000516265 MYCNP04198 464 aaPredicted RBP11.93□□□□□ -0.5
RNU6-416P-201ENST00000516265 DCAF8L1A6NGE4 600 aa11.89□□□□□ -0.51
RNU6-416P-201ENST00000516265 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
RNU6-416P-201ENST00000516265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.77□□□□□ -0.53
RNU6-416P-201ENST00000516265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.66□□□□□ -0.54
RNU6-416P-201ENST00000516265 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
RNU6-416P-201ENST00000516265 SAMD1Q6SPF0 538 aaPredicted RBP11.62□□□□□ -0.55
RNU6-416P-201ENST00000516265 FKBP8Q14318 412 aa11.56□□□□□ -0.56
RNU6-416P-201ENST00000516265 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
RNU6-416P-201ENST00000516265 ATF5Q9Y2D1 282 aaPredicted RBP11.5□□□□□ -0.57
RNU6-416P-201ENST00000516265 APLP2Q06481 763 aa11.46□□□□□ -0.57
RNU6-416P-201ENST00000516265 AMER1Q5JTC6 1135 aaPredicted RBP11.4□□□□□ -0.58
RNU6-416P-201ENST00000516265 ZNF219Q9P2Y4 722 aaPredicted RBP11.34□□□□□ -0.59
RNU6-416P-201ENST00000516265 RTN4Q9NQC3 1192 aaKnown RBP11.32□□□□□ -0.6
RNU6-416P-201ENST00000516265 TRHP20396 242 aaPredicted RBP11.16□□□□□ -0.62
RNU6-416P-201ENST00000516265 FBLN2P98095 1184 aa11.12□□□□□ -0.63
RNU6-416P-201ENST00000516265 CAPN15O75808 1086 aa11.1□□□□□ -0.63
RNU6-416P-201ENST00000516265 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
RNU6-416P-201ENST00000516265 RNF39Q9H2S5 420 aa11.08□□□□□ -0.64
RNU6-416P-201ENST00000516265 SPINK5Q9NQ38 1064 aaPredicted RBP11.08□□□□□ -0.64
RNU6-416P-201ENST00000516265 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
RNU6-416P-201ENST00000516265 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
RNU6-416P-201ENST00000516265 POLA2Q14181 598 aa11.06□□□□□ -0.64
RNU6-416P-201ENST00000516265 C1QBPQ07021 282 aaKnown RBP11.02□□□□□ -0.65
RNU6-416P-201ENST00000516265 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
RNU6-416P-201ENST00000516265 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
RNU6-416P-201ENST00000516265 ABCB7O75027 752 aa10.89□□□□□ -0.67
RNU6-416P-201ENST00000516265 POTEDQ86YR6 584 aa10.89□□□□□ -0.67
RNU6-416P-201ENST00000516265 PROM2Q8N271 834 aa10.87□□□□□ -0.67
RNU6-416P-201ENST00000516265 VASPP50552 380 aaPredicted RBP10.84□□□□□ -0.67
RNU6-416P-201ENST00000516265 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
RNU6-416P-201ENST00000516265 DSG3P32926 999 aa10.71□□□□□ -0.69
RNU6-416P-201ENST00000516265 IFNLR1Q8IU57 520 aaPredicted RBP10.7□□□□□ -0.7
RNU6-416P-201ENST00000516265 SPDYE2BA6NHP3 402 aa10.65□□□□□ -0.7
RNU6-416P-201ENST00000516265 SPDYE6P0CI01 402 aa10.65□□□□□ -0.7
RNU6-416P-201ENST00000516265 SPDYE2Q495Y8 402 aa10.65□□□□□ -0.7
RNU6-416P-201ENST00000516265 DCAF8L2P0C7V8 631 aa10.64□□□□□ -0.71
RNU6-416P-201ENST00000516265 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
RNU6-416P-201ENST00000516265 KLHL34Q8N239 644 aa10.64□□□□□ -0.71
RNU6-416P-201ENST00000516265 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
RNU6-416P-201ENST00000516265 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
RNU6-416P-201ENST00000516265 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
RNU6-416P-201ENST00000516265 SSUH2Q9Y2M2 353 aa10.56□□□□□ -0.72
RNU6-416P-201ENST00000516265 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
RNU6-416P-201ENST00000516265 CACNB1Q02641 598 aaPredicted RBP10.53□□□□□ -0.72
RNU6-416P-201ENST00000516265 MIER1Q8N108 512 aa10.52□□□□□ -0.73
RNU6-416P-201ENST00000516265 PKD2Q13563 968 aa10.51□□□□□ -0.73
RNU6-416P-201ENST00000516265 PLEKHG5O94827 1062 aa10.49□□□□□ -0.73
RNU6-416P-201ENST00000516265 PLCB2Q00722 1185 aa10.49□□□□□ -0.73
RNU6-416P-201ENST00000516265 ECM2O94769 699 aaPredicted RBP10.44□□□□□ -0.74
RNU6-416P-201ENST00000516265 ZBTB47Q9UFB7 747 aaPredicted RBP10.42□□□□□ -0.74
RNU6-416P-201ENST00000516265 HAP1P54257 671 aaPredicted RBP10.4□□□□□ -0.74
RNU6-416P-201ENST00000516265 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.36□□□□□ -0.75
RNU6-416P-201ENST00000516265 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
RNU6-416P-201ENST00000516265 BBXQ8WY36 941 aaPredicted RBP10.3□□□□□ -0.76
RNU6-416P-201ENST00000516265 RBM42Q9BTD8 480 aaKnown RBP10.28□□□□□ -0.76
RNU6-416P-201ENST00000516265 RGL2O15211 777 aa10.26□□□□□ -0.77
RNU6-416P-201ENST00000516265 SPDYE1Q8NFV5 336 aaPredicted RBP10.25□□□□□ -0.77
RNU6-416P-201ENST00000516265 TRIM41Q8WV44 630 aa10.24□□□□□ -0.77
RNU6-416P-201ENST00000516265 PAXIP1Q6ZW49 1069 aaPredicted RBP10.23□□□□□ -0.77
RNU6-416P-201ENST00000516265 CFAP44Q96MT7 982 aa10.23□□□□□ -0.77
RNU6-416P-201ENST00000516265 VSIG10Q8N0Z9 540 aa10.22□□□□□ -0.77
RNU6-416P-201ENST00000516265 AKT1S1Q96B36 256 aa10.22□□□□□ -0.77
RNU6-416P-201ENST00000516265 CLEC11AQ9Y240 323 aa10.21□□□□□ -0.77
RNU6-416P-201ENST00000516265 NPM1P06748 294 aaKnown RBP eCLIP10.2□□□□□ -0.78
RNU6-416P-201ENST00000516265 GSE1Q14687 1217 aa10.2□□□□□ -0.78
RNU6-416P-201ENST00000516265 CHGAP10645 457 aaKnown RBP10.19□□□□□ -0.78
RNU6-416P-201ENST00000516265 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
RNU6-416P-201ENST00000516265 SPRYD3Q8NCJ5 442 aa10.17□□□□□ -0.78
RNU6-416P-201ENST00000516265 DCAF8Q5TAQ9 597 aa10.15□□□□□ -0.78
RNU6-416P-201ENST00000516265 BCANQ96GW7 911 aa10.14□□□□□ -0.79
RNU6-416P-201ENST00000516265 TAOK2Q9UL54 1235 aa10.12□□□□□ -0.79
RNU6-416P-201ENST00000516265 NUBP1P53384 320 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms