Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC133552.5-201ENST00000604266 540 ntBASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 AC012676.3-201ENST00000614983 479 ntBASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 SNX18P10-201ENST00000625014 519 ntBASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 AC099063.3-201ENST00000642066 185 ntBASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 AC104162.1-201ENST00000430831 2382 ntBASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ARHGEF39Q8N4T4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 MRRFP1-201ENST00000435941 1675 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC062022.1-201ENST00000451026 1684 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 IMMTP1-201ENST00000435590 2219 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 RNU6-621P-201ENST00000364752 109 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 Y_RNA.516-201ENST00000384541 124 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 MIR320B1-201ENST00000390209 79 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 RN7SKP129-201ENST00000410288 299 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 RN7SKP221-201ENST00000410420 301 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 RPL7AP51-201ENST00000422016 760 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 RPL21P110-201ENST00000433345 446 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 LINC00328-2P-201ENST00000436585 219 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 FABP5P2-201ENST00000439042 408 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 PMS2P9-201ENST00000441237 515 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 RPS18P1-201ENST00000447840 458 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC005165.2-201ENST00000466070 380 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 SETP14-201ENST00000497538 873 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 DUXAP2-201ENST00000519198 589 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC112220.3-201ENST00000605502 502 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC005962.2-201ENST00000611427 652 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC138749.5-201ENST00000611461 208 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 U1.41-201ENST00000617626 165 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AC087565.3-203ENST00000641018 837 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 SAMMSON-209ENST00000641222 1100 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 CASC19-228ENST00000641414 1684 ntBASIC6.2□□□□□ -1.42
ARHGEF39Q8N4T4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ARHGEF39Q8N4T4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
ARHGEF39Q8N4T4 AL121950.1-201ENST00000624993 2077 ntBASIC6.19□□□□□ -1.42
ARHGEF39Q8N4T4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ARHGEF39Q8N4T4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms