RNA–Protein interactions for RNA: ENST00000641222.1

SAMMSON-209, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,100 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-209ENST00000641222 AEBP2Q6ZN18 517 aaPredicted RBP24.07■■□□□ 1.44
SAMMSON-209ENST00000641222 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
SAMMSON-209ENST00000641222 SENP3Q9H4L4 574 aaPredicted RBP20.59■□□□□ 0.89
SAMMSON-209ENST00000641222 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
SAMMSON-209ENST00000641222 FOXD1Q16676 465 aa19.07■□□□□ 0.64
SAMMSON-209ENST00000641222 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
SAMMSON-209ENST00000641222 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
SAMMSON-209ENST00000641222 ADRA2BP18089 450 aa18.04■□□□□ 0.48
SAMMSON-209ENST00000641222 PIAS4Q8N2W9 510 aaPredicted RBP17.95■□□□□ 0.46
SAMMSON-209ENST00000641222 MSH5O43196 834 aa17.81■□□□□ 0.44
SAMMSON-209ENST00000641222 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
SAMMSON-209ENST00000641222 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
SAMMSON-209ENST00000641222 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
SAMMSON-209ENST00000641222 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
SAMMSON-209ENST00000641222 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
SAMMSON-209ENST00000641222 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
SAMMSON-209ENST00000641222 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
SAMMSON-209ENST00000641222 RNF216Q9NWF9 866 aaPredicted RBP15.89■□□□□ 0.13
SAMMSON-209ENST00000641222 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
SAMMSON-209ENST00000641222 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
SAMMSON-209ENST00000641222 KCNA4P22459 653 aa15.7■□□□□ 0.1
SAMMSON-209ENST00000641222 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
SAMMSON-209ENST00000641222 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
SAMMSON-209ENST00000641222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
SAMMSON-209ENST00000641222 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
SAMMSON-209ENST00000641222 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
SAMMSON-209ENST00000641222 C1QBPQ07021 282 aaKnown RBP15.02■□□□□ -0
SAMMSON-209ENST00000641222 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
SAMMSON-209ENST00000641222 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
SAMMSON-209ENST00000641222 U3KPZ7 1027 aaPredicted RBP14.84□□□□□ -0.03
SAMMSON-209ENST00000641222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
SAMMSON-209ENST00000641222 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
SAMMSON-209ENST00000641222 APLP2Q06481 763 aa14.61□□□□□ -0.07
SAMMSON-209ENST00000641222 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
SAMMSON-209ENST00000641222 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
SAMMSON-209ENST00000641222 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
SAMMSON-209ENST00000641222 CAPN15O75808 1086 aa14.52□□□□□ -0.09
SAMMSON-209ENST00000641222 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
SAMMSON-209ENST00000641222 ZBTB22O15209 634 aa14.4□□□□□ -0.1
SAMMSON-209ENST00000641222 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
SAMMSON-209ENST00000641222 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
SAMMSON-209ENST00000641222 DSG3P32926 999 aa14.32□□□□□ -0.12
SAMMSON-209ENST00000641222 ABCB7O75027 752 aa14.17□□□□□ -0.14
SAMMSON-209ENST00000641222 ATXN8OSP0DMR3 200 aa14.15□□□□□ -0.14
SAMMSON-209ENST00000641222 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
SAMMSON-209ENST00000641222 ATF5Q9Y2D1 282 aaPredicted RBP14.1□□□□□ -0.15
SAMMSON-209ENST00000641222 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
SAMMSON-209ENST00000641222 POLA2Q14181 598 aa14.04□□□□□ -0.16
SAMMSON-209ENST00000641222 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
SAMMSON-209ENST00000641222 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
SAMMSON-209ENST00000641222 FBLN2P98095 1184 aa13.67□□□□□ -0.22
SAMMSON-209ENST00000641222 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
SAMMSON-209ENST00000641222 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
SAMMSON-209ENST00000641222 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
SAMMSON-209ENST00000641222 SPDYE2BA6NHP3 402 aa13.44□□□□□ -0.26
SAMMSON-209ENST00000641222 SPDYE6P0CI01 402 aa13.44□□□□□ -0.26
SAMMSON-209ENST00000641222 SPDYE2Q495Y8 402 aa13.44□□□□□ -0.26
SAMMSON-209ENST00000641222 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
SAMMSON-209ENST00000641222 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
SAMMSON-209ENST00000641222 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
SAMMSON-209ENST00000641222 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
SAMMSON-209ENST00000641222 POTEHQ6S545 545 aa13.19□□□□□ -0.3
SAMMSON-209ENST00000641222 NISCHQ9Y2I1 1504 aa13.18□□□□□ -0.3
SAMMSON-209ENST00000641222 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
SAMMSON-209ENST00000641222 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
SAMMSON-209ENST00000641222 PABPN1Q86U42 306 aaKnown RBP eCLIP13.11□□□□□ -0.31
SAMMSON-209ENST00000641222 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
SAMMSON-209ENST00000641222 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
SAMMSON-209ENST00000641222 PIP4P2Q8N4L2 257 aa12.98□□□□□ -0.33
SAMMSON-209ENST00000641222 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
SAMMSON-209ENST00000641222 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
SAMMSON-209ENST00000641222 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
SAMMSON-209ENST00000641222 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
SAMMSON-209ENST00000641222 PROM2Q8N271 834 aa12.81□□□□□ -0.36
SAMMSON-209ENST00000641222 FKBP8Q14318 412 aa12.79□□□□□ -0.36
SAMMSON-209ENST00000641222 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
SAMMSON-209ENST00000641222 HAX1O00165 279 aa12.68□□□□□ -0.38
SAMMSON-209ENST00000641222 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
SAMMSON-209ENST00000641222 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
SAMMSON-209ENST00000641222 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
SAMMSON-209ENST00000641222 SP7Q8TDD2 431 aaPredicted RBP12.53□□□□□ -0.4
SAMMSON-209ENST00000641222 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
SAMMSON-209ENST00000641222 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
SAMMSON-209ENST00000641222 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
SAMMSON-209ENST00000641222 MIER1Q8N108 512 aa12.46□□□□□ -0.41
SAMMSON-209ENST00000641222 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
SAMMSON-209ENST00000641222 EVX2Q03828 476 aa12.45□□□□□ -0.42
SAMMSON-209ENST00000641222 PLCD3Q8N3E9 789 aa12.43□□□□□ -0.42
SAMMSON-209ENST00000641222 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
SAMMSON-209ENST00000641222 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
SAMMSON-209ENST00000641222 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
SAMMSON-209ENST00000641222 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
SAMMSON-209ENST00000641222 CLCN6P51797 869 aa12.3□□□□□ -0.44
SAMMSON-209ENST00000641222 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
SAMMSON-209ENST00000641222 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
SAMMSON-209ENST00000641222 GABBR2O75899 941 aa12.25□□□□□ -0.45
SAMMSON-209ENST00000641222 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
SAMMSON-209ENST00000641222 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
SAMMSON-209ENST00000641222 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
SAMMSON-209ENST00000641222 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms