Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 RN7SKP208-201ENST00000365474 361 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 RNU6-185P-201ENST00000384421 107 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AL590635.1-201ENST00000406314 586 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 MIR1302-3-201ENST00000408128 138 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 JKAMPP1-201ENST00000413804 919 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 GEMIN2P2-201ENST00000418195 715 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 MTCO1P3-201ENST00000429327 192 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 RPL7P48-201ENST00000461513 746 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 RPSAP39-201ENST00000467439 883 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 RPL7P19-201ENST00000469948 618 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 NDUFB4P2-201ENST00000509515 391 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 RNU6-1170P-201ENST00000515974 106 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 RNU6-1281P-201ENST00000516223 105 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 Y_RNA.720-201ENST00000517166 92 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 HMGB1P41-201ENST00000520234 440 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AC008269.2-201ENST00000561915 1105 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AC008507.3-201ENST00000585753 472 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 XIAPP1-201ENST00000603162 600 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AC024940.4-201ENST00000605507 246 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AC069209.1-201ENST00000619282 651 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AP000648.2-201ENST00000624182 404 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AC073488.6-201ENST00000632293 754 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 Z83820.1-201ENST00000456978 1499 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 AC107398.3-201ENST00000562284 7000 ntBASIC7.21□□□□□ -1.26
COL25A1Q9BXS0 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 CPNE4-210ENST00000512332 2230 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 TRIM60P19-201ENST00000452879 1462 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 RPL11P4-201ENST00000332269 436 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 RNU5F-6P-201ENST00000362979 116 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 RNU6-1251P-201ENST00000364502 107 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 MIR548I3-201ENST00000408378 149 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 MIR548I1-201ENST00000408810 149 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 RPL37P18-201ENST00000411602 243 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 SDCBPP2-201ENST00000424643 885 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 Z82205.1-201ENST00000428456 297 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 MTCYBP9-201ENST00000431021 303 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 RPS25P9-201ENST00000435591 252 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AC005040.1-201ENST00000437783 482 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 PTMAP6-201ENST00000439110 327 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AL672138.1-201ENST00000450604 1015 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 RPSAP7-201ENST00000456871 885 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 RNU6-1208P-201ENST00000459588 107 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 RN7SL826P-201ENST00000479724 288 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AC026412.2-201ENST00000512270 1075 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 ZNF519P4-201ENST00000514008 125 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 SNORA18.6-201ENST00000516792 115 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AC008802.1-201ENST00000519121 791 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 AC087752.2-201ENST00000521219 281 ntBASIC7.2□□□□□ -1.26
COL25A1Q9BXS0 DPPA3P2-202ENST00000557188 1219 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms