RNA–Protein interactions for RNA: ENST00000502705.5

PTPN20-213, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-213ENST00000502705 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
PTPN20-213ENST00000502705 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
PTPN20-213ENST00000502705 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
PTPN20-213ENST00000502705 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
PTPN20-213ENST00000502705 FOXD1Q16676 465 aa17.21■□□□□ 0.35
PTPN20-213ENST00000502705 PLPPR3Q6T4P5 718 aa16.25■□□□□ 0.19
PTPN20-213ENST00000502705 MSH5O43196 834 aa16.24■□□□□ 0.19
PTPN20-213ENST00000502705 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
PTPN20-213ENST00000502705 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
PTPN20-213ENST00000502705 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
PTPN20-213ENST00000502705 ADRA2BP18089 450 aa15.92■□□□□ 0.14
PTPN20-213ENST00000502705 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
PTPN20-213ENST00000502705 MAPK8IP2Q13387 824 aaPredicted RBP14.67□□□□□ -0.06
PTPN20-213ENST00000502705 DMRT2Q9Y5R5 561 aa14.61□□□□□ -0.07
PTPN20-213ENST00000502705 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
PTPN20-213ENST00000502705 DCAF8L1A6NGE4 600 aa14.12□□□□□ -0.15
PTPN20-213ENST00000502705 CACNB1Q02641 598 aaPredicted RBP14.07□□□□□ -0.16
PTPN20-213ENST00000502705 HOXD11P31277 338 aaPredicted RBP14□□□□□ -0.17
PTPN20-213ENST00000502705 CNKSR2Q8WXI2 1034 aa14□□□□□ -0.17
PTPN20-213ENST00000502705 RNF216Q9NWF9 866 aaPredicted RBP13.89□□□□□ -0.19
PTPN20-213ENST00000502705 RNF39Q9H2S5 420 aa13.78□□□□□ -0.2
PTPN20-213ENST00000502705 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
PTPN20-213ENST00000502705 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
PTPN20-213ENST00000502705 DNAJC5BQ9UF47 199 aa13.59□□□□□ -0.23
PTPN20-213ENST00000502705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.26
PTPN20-213ENST00000502705 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
PTPN20-213ENST00000502705 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
PTPN20-213ENST00000502705 CAPN15O75808 1086 aa12.96□□□□□ -0.33
PTPN20-213ENST00000502705 KCNA4P22459 653 aa12.96□□□□□ -0.33
PTPN20-213ENST00000502705 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
PTPN20-213ENST00000502705 DSG3P32926 999 aa12.87□□□□□ -0.35
PTPN20-213ENST00000502705 APLP2Q06481 763 aa12.81□□□□□ -0.36
PTPN20-213ENST00000502705 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
PTPN20-213ENST00000502705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-213ENST00000502705 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
PTPN20-213ENST00000502705 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
PTPN20-213ENST00000502705 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-213ENST00000502705 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
PTPN20-213ENST00000502705 ABCB7O75027 752 aa12.6□□□□□ -0.39
PTPN20-213ENST00000502705 POTEHQ6S545 545 aa12.59□□□□□ -0.39
PTPN20-213ENST00000502705 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
PTPN20-213ENST00000502705 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
PTPN20-213ENST00000502705 POLA2Q14181 598 aa12.33□□□□□ -0.44
PTPN20-213ENST00000502705 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
PTPN20-213ENST00000502705 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
PTPN20-213ENST00000502705 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
PTPN20-213ENST00000502705 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-213ENST00000502705 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
PTPN20-213ENST00000502705 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
PTPN20-213ENST00000502705 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
PTPN20-213ENST00000502705 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
PTPN20-213ENST00000502705 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
PTPN20-213ENST00000502705 ZBTB22O15209 634 aa11.84□□□□□ -0.51
PTPN20-213ENST00000502705 FBLN2P98095 1184 aa11.75□□□□□ -0.53
PTPN20-213ENST00000502705 PIP4P2Q8N4L2 257 aa11.75□□□□□ -0.53
PTPN20-213ENST00000502705 SP7Q8TDD2 431 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-213ENST00000502705 PITPNM1O00562 1244 aa11.71□□□□□ -0.53
PTPN20-213ENST00000502705 SPDYE2BA6NHP3 402 aa11.69□□□□□ -0.54
PTPN20-213ENST00000502705 SPDYE6P0CI01 402 aa11.69□□□□□ -0.54
PTPN20-213ENST00000502705 SPDYE2Q495Y8 402 aa11.69□□□□□ -0.54
PTPN20-213ENST00000502705 HAX1O00165 279 aa11.68□□□□□ -0.54
PTPN20-213ENST00000502705 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTPN20-213ENST00000502705 ZNF692Q9BU19 519 aaPredicted RBP11.55□□□□□ -0.56
PTPN20-213ENST00000502705 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
PTPN20-213ENST00000502705 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
PTPN20-213ENST00000502705 MKRN4PQ13434 485 aaPredicted RBP11.49□□□□□ -0.57
PTPN20-213ENST00000502705 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.57
PTPN20-213ENST00000502705 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
PTPN20-213ENST00000502705 EVX2Q03828 476 aa11.39□□□□□ -0.59
PTPN20-213ENST00000502705 PRR29P0C7W0 189 aa11.35□□□□□ -0.59
PTPN20-213ENST00000502705 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTPN20-213ENST00000502705 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
PTPN20-213ENST00000502705 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
PTPN20-213ENST00000502705 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
PTPN20-213ENST00000502705 GABBR2O75899 941 aa11.19□□□□□ -0.62
PTPN20-213ENST00000502705 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
PTPN20-213ENST00000502705 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
PTPN20-213ENST00000502705 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
PTPN20-213ENST00000502705 CLCN6P51797 869 aa11.06□□□□□ -0.64
PTPN20-213ENST00000502705 LHX8Q68G74 356 aa11.03□□□□□ -0.64
PTPN20-213ENST00000502705 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
PTPN20-213ENST00000502705 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.65
PTPN20-213ENST00000502705 DCBLD2Q96PD2 775 aa10.94□□□□□ -0.66
PTPN20-213ENST00000502705 ZRANB1Q9UGI0 708 aa10.93□□□□□ -0.66
PTPN20-213ENST00000502705 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
PTPN20-213ENST00000502705 POTEIP0CG38 1075 aa10.88□□□□□ -0.67
PTPN20-213ENST00000502705 ZNF579Q8NAF0 562 aaKnown RBP10.88□□□□□ -0.67
PTPN20-213ENST00000502705 PAK3O75914 559 aaPredicted RBP10.87□□□□□ -0.67
PTPN20-213ENST00000502705 NPM1P06748 294 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTPN20-213ENST00000502705 GALR2O43603 387 aaPredicted RBP10.74□□□□□ -0.69
PTPN20-213ENST00000502705 NISCHQ9Y2I1 1504 aa10.69□□□□□ -0.7
PTPN20-213ENST00000502705 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
PTPN20-213ENST00000502705 MNX1P50219 401 aaPredicted RBP10.67□□□□□ -0.7
PTPN20-213ENST00000502705 PLEKHG5O94827 1062 aa10.61□□□□□ -0.71
PTPN20-213ENST00000502705 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
PTPN20-213ENST00000502705 PROM2Q8N271 834 aa10.57□□□□□ -0.72
PTPN20-213ENST00000502705 MIER1Q8N108 512 aa10.55□□□□□ -0.72
PTPN20-213ENST00000502705 OTUD5Q96G74 571 aa10.55□□□□□ -0.72
PTPN20-213ENST00000502705 MS4A3Q96HJ5 214 aa10.55□□□□□ -0.72
PTPN20-213ENST00000502705 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms