Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 DPP3P2-201ENST00000416030 1696 ntBASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 NFIC-211ENST00000641145 8399 ntBASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 AC006333.2-201ENST00000607957 2099 ntBASIC14.85□□□□□ -0.03
TRAPPC1Q9Y5R8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 RPS2P35-201ENST00000443417 897 ntBASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 AC129492.7-201ENST00000622992 756 ntBASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAPPC1Q9Y5R8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAPPC1Q9Y5R8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TRAPPC1Q9Y5R8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 AC009053.2-201ENST00000563701 2365 ntBASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
TRAPPC1Q9Y5R8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms