Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 NIFKP9-201ENST00000419265 221 ntBASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 KSR1P1-201ENST00000446298 240 ntBASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 NUDT16P1-203ENST00000513809 620 ntBASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 PHGDH-210ENST00000641115 1638 ntBASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHB2Q9Y5E7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 CR392000.1-201ENST00000624770 1228 ntBASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 AC133561.5-201ENST00000635547 218 ntBASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
PCDHB2Q9Y5E7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.45■■□□□ 1.03
PCDHB2Q9Y5E7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
PCDHB2Q9Y5E7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHB2Q9Y5E7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.03
PCDHB2Q9Y5E7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 TCF3P1-201ENST00000423021 1937 ntBASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHB2Q9Y5E7 BX119927.1-201ENST00000636596 1552 ntBASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 YBX1P10-201ENST00000444752 975 ntBASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 REXO1L10P-201ENST00000615707 1290 ntBASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PCDHB2Q9Y5E7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.43■■□□□ 1.02
PCDHB2Q9Y5E7 C1QL1P1-201ENST00000568105 661 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms