Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 AP001271.2-201ENST00000624018 1556 ntBASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB9Q9Y5E1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB9Q9Y5E1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHB9Q9Y5E1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHB9Q9Y5E1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 AC012306.2-201ENST00000609350 630 ntBASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB9Q9Y5E1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 AL355355.2-201ENST00000442321 338 ntBASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHB9Q9Y5E1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms