Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 AL355001.2-201ENST00000620617 1191 ntBASIC18.5■□□□□ 0.55
AP4S1Q9Y587 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP4S1Q9Y587 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.49■□□□□ 0.55
AP4S1Q9Y587 PGM5P4-201ENST00000421970 445 ntBASIC18.49■□□□□ 0.55
AP4S1Q9Y587 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP4S1Q9Y587 KRT16P6-202ENST00000425692 1426 ntBASIC18.49■□□□□ 0.55
AP4S1Q9Y587 KRT8P17-201ENST00000453110 1448 ntBASIC18.49■□□□□ 0.55
AP4S1Q9Y587 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 AC105265.2-201ENST00000467189 838 ntBASIC18.48■□□□□ 0.55
AP4S1Q9Y587 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 AC243732.1-201ENST00000612648 864 ntBASIC18.48■□□□□ 0.55
AP4S1Q9Y587 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP4S1Q9Y587 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 AL136162.1-201ENST00000607711 1078 ntBASIC18.47■□□□□ 0.55
AP4S1Q9Y587 AL356652.1-201ENST00000615962 565 ntBASIC18.47■□□□□ 0.55
AP4S1Q9Y587 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP4S1Q9Y587 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms