Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.18■□□□□ 0.98
CAPN11Q9UMQ6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CAPN11Q9UMQ6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CAPN11Q9UMQ6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CAPN11Q9UMQ6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN11Q9UMQ6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN11Q9UMQ6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 AL161938.1-201ENST00000569833 2180 ntBASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 AC026271.2-201ENST00000428091 497 ntBASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 TFP1-202ENST00000475455 1573 ntBASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CAPN11Q9UMQ6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN11Q9UMQ6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 AC141586.3-201ENST00000562166 1838 ntBASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN11Q9UMQ6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.14■□□□□ 0.98
CAPN11Q9UMQ6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN11Q9UMQ6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN11Q9UMQ6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN11Q9UMQ6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CAPN11Q9UMQ6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN11Q9UMQ6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN11Q9UMQ6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CAPN11Q9UMQ6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 TEX21P-204ENST00000641479 1693 ntBASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN11Q9UMQ6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms