Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC116562.2-201ENST00000507042 360 ntBASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 FEM1AP1-201ENST00000431297 1995 ntBASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDC42EP3Q9UKI2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.33■□□□□ 0.21
CDC42EP3Q9UKI2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDC42EP3Q9UKI2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CDC42EP3Q9UKI2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDC42EP3Q9UKI2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.33■□□□□ 0.21
CDC42EP3Q9UKI2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDC42EP3Q9UKI2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 LINC01238-205ENST00000567549 1107 ntBASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 AC010947.1-201ENST00000623454 693 ntBASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC42EP3Q9UKI2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 KRT16P1-201ENST00000399124 1418 ntBASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 CYP2D8P-201ENST00000433633 1490 ntBASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 CR392000.1-201ENST00000624770 1228 ntBASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC42EP3Q9UKI2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 NIFKP9-201ENST00000419265 221 ntBASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 AL390955.1-201ENST00000428694 934 ntBASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC42EP3Q9UKI2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms