Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH4Q9P003 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNIH4Q9P003 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH4Q9P003 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CNIH4Q9P003 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH4Q9P003 GCSHP5-201ENST00000443090 522 ntBASIC18.3■□□□□ 0.52
CNIH4Q9P003 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.3■□□□□ 0.52
CNIH4Q9P003 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH4Q9P003 RPS2P52-201ENST00000469610 820 ntBASIC18.3■□□□□ 0.52
CNIH4Q9P003 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CNIH4Q9P003 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH4Q9P003 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH4Q9P003 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH4Q9P003 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNIH4Q9P003 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH4Q9P003 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH4Q9P003 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH4Q9P003 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH4Q9P003 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH4Q9P003 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH4Q9P003 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH4Q9P003 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH4Q9P003 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH4Q9P003 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.29■□□□□ 0.52
CNIH4Q9P003 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CNIH4Q9P003 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.29■□□□□ 0.52
CNIH4Q9P003 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH4Q9P003 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNIH4Q9P003 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH4Q9P003 AC098590.1-201ENST00000468126 897 ntBASIC18.29■□□□□ 0.52
CNIH4Q9P003 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CNIH4Q9P003 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CNIH4Q9P003 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH4Q9P003 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CNIH4Q9P003 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH4Q9P003 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH4Q9P003 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH4Q9P003 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CNIH4Q9P003 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH4Q9P003 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH4Q9P003 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 PRKY-204ENST00000533551 1019 ntBASIC18.28■□□□□ 0.52
CNIH4Q9P003 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 AC233263.1-201ENST00000578059 224 ntBASIC18.28■□□□□ 0.52
CNIH4Q9P003 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 MTDHP1-201ENST00000605323 784 ntBASIC18.28■□□□□ 0.52
CNIH4Q9P003 AL121829.2-201ENST00000620908 328 ntBASIC18.28■□□□□ 0.52
CNIH4Q9P003 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 KRT16P6-202ENST00000425692 1426 ntBASIC18.28■□□□□ 0.52
CNIH4Q9P003 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH4Q9P003 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.28■□□□□ 0.52
CNIH4Q9P003 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.27■□□□□ 0.52
CNIH4Q9P003 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH4Q9P003 TMEM179-206ENST00000616017 1645 ntBASIC18.27■□□□□ 0.52
CNIH4Q9P003 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH4Q9P003 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH4Q9P003 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH4Q9P003 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CNIH4Q9P003 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH4Q9P003 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.27■□□□□ 0.52
CNIH4Q9P003 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.27■□□□□ 0.52
CNIH4Q9P003 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH4Q9P003 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH4Q9P003 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH4Q9P003 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.27■□□□□ 0.52
CNIH4Q9P003 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH4Q9P003 AL158047.1-201ENST00000445918 881 ntBASIC18.27■□□□□ 0.52
CNIH4Q9P003 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.27■□□□□ 0.52
CNIH4Q9P003 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.27■□□□□ 0.52
CNIH4Q9P003 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.27■□□□□ 0.52
CNIH4Q9P003 C1QBPP2-201ENST00000528754 825 ntBASIC18.27■□□□□ 0.52
CNIH4Q9P003 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.27■□□□□ 0.52
CNIH4Q9P003 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms