Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 AC008403.3-201ENST00000598924 454 ntBASIC19.94■□□□□ 0.78
UBP1Q9NZI7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBP1Q9NZI7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBP1Q9NZI7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 AC093484.2-201ENST00000580996 2166 ntBASIC19.92■□□□□ 0.78
UBP1Q9NZI7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.92■□□□□ 0.78
UBP1Q9NZI7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 AP003097.1-201ENST00000530657 1135 ntBASIC19.91■□□□□ 0.78
UBP1Q9NZI7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 AL121906.2-201ENST00000621597 723 ntBASIC19.91■□□□□ 0.78
UBP1Q9NZI7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBP1Q9NZI7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms