Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 AC069236.1-201ENST00000604339 616 ntBASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 AC009113.1-201ENST00000570267 2443 ntBASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 OR10C1-204ENST00000622521 1039 ntBASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC52A3Q9NQ40 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 AL512625.2-201ENST00000417533 625 ntBASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 AC093787.1-201ENST00000450396 207 ntBASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC52A3Q9NQ40 ZNF815P-204ENST00000434898 1737 ntBASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 AC104581.1-202ENST00000635932 2618 ntBASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 FP475955.4-201ENST00000623131 1990 ntBASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SLC52A3Q9NQ40 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms