Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 AC135279.3-201ENST00000610945 1311 ntBASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 DUX4L2-201ENST00000561772 1275 ntBASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 DUX4L6-201ENST00000626483 1275 ntBASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 DUX4L1-201ENST00000627662 1275 ntBASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 DUX4L8-201ENST00000629013 1275 ntBASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 DUX4L3-201ENST00000630187 1275 ntBASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 DUX4L7-201ENST00000630678 1275 ntBASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 DUX4L5-201ENST00000630834 1275 ntBASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNF1Q9H3M0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
KCNF1Q9H3M0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 AP001160.3-201ENST00000601484 763 ntBASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 AL031963.3-201ENST00000606441 850 ntBASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNF1Q9H3M0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 IRS3P-201ENST00000223076 1006 ntBASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 AL136116.3-201ENST00000402907 1138 ntBASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 AC104187.1-201ENST00000607510 612 ntBASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
KCNF1Q9H3M0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.33■■□□□ 1
KCNF1Q9H3M0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
KCNF1Q9H3M0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
KCNF1Q9H3M0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.33■■□□□ 1
KCNF1Q9H3M0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.33■■□□□ 1
KCNF1Q9H3M0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1
KCNF1Q9H3M0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.32■■□□□ 1
KCNF1Q9H3M0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KCNF1Q9H3M0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNF1Q9H3M0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNF1Q9H3M0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNF1Q9H3M0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
KCNF1Q9H3M0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.32■■□□□ 1
KCNF1Q9H3M0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNF1Q9H3M0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNF1Q9H3M0 AC139713.2-201ENST00000641328 2723 ntBASIC21.32■■□□□ 1
KCNF1Q9H3M0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNF1Q9H3M0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms