Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 KRT18P21-201ENST00000515767 1272 ntBASIC20.32■□□□□ 0.84
RNF38Q9H0F5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 FITM1-202ENST00000559294 800 ntBASIC20.32■□□□□ 0.84
RNF38Q9H0F5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 MIR6786-201ENST00000616843 113 ntBASIC20.32■□□□□ 0.84
RNF38Q9H0F5 AC131212.4-201ENST00000623606 975 ntBASIC20.32■□□□□ 0.84
RNF38Q9H0F5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 KRT8P8-201ENST00000434750 1448 ntBASIC20.31■□□□□ 0.84
RNF38Q9H0F5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 B3GAT3P1-201ENST00000471720 806 ntBASIC20.31■□□□□ 0.84
RNF38Q9H0F5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 AC026271.3-201ENST00000571884 352 ntBASIC20.31■□□□□ 0.84
RNF38Q9H0F5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF38Q9H0F5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF38Q9H0F5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF38Q9H0F5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 RCN1P1-201ENST00000400413 996 ntBASIC20.28■□□□□ 0.84
RNF38Q9H0F5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 AC008040.2-201ENST00000461049 708 ntBASIC20.28■□□□□ 0.84
RNF38Q9H0F5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 AC130371.2-201ENST00000619443 611 ntBASIC20.28■□□□□ 0.84
RNF38Q9H0F5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms