Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 AC124283.5-201ENST00000624661 1809 ntBASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 AL512408.1-201ENST00000569378 2000 ntBASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCGF1Q9BSM1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCGF1Q9BSM1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 MTDHP1-201ENST00000605323 784 ntBASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 AL031963.3-201ENST00000606441 850 ntBASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCGF1Q9BSM1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 RPS2P4-201ENST00000476944 856 ntBASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCGF1Q9BSM1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCGF1Q9BSM1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCGF1Q9BSM1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCGF1Q9BSM1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCGF1Q9BSM1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCGF1Q9BSM1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms