Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL13Q99616 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CCL13Q99616 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCL13Q99616 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCL13Q99616 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL13Q99616 NBPF21P-201ENST00000425093 1451 ntBASIC16.42■□□□□ 0.22
CCL13Q99616 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL13Q99616 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL13Q99616 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL13Q99616 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCL13Q99616 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.41■□□□□ 0.22
CCL13Q99616 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL13Q99616 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCL13Q99616 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.41■□□□□ 0.22
CCL13Q99616 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL13Q99616 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL13Q99616 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL13Q99616 RPPH1-201ENST00000516869 333 ntBASIC16.41■□□□□ 0.22
CCL13Q99616 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.41■□□□□ 0.22
CCL13Q99616 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL13Q99616 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.41■□□□□ 0.22
CCL13Q99616 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL13Q99616 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL13Q99616 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL13Q99616 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL13Q99616 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL13Q99616 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL13Q99616 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CCL13Q99616 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.41■□□□□ 0.22
CCL13Q99616 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL13Q99616 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL13Q99616 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL13Q99616 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CCL13Q99616 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.4■□□□□ 0.22
CCL13Q99616 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CCL13Q99616 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCL13Q99616 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCL13Q99616 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCL13Q99616 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL13Q99616 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCL13Q99616 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCL13Q99616 AL158047.1-201ENST00000445918 881 ntBASIC16.4■□□□□ 0.22
CCL13Q99616 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.4■□□□□ 0.22
CCL13Q99616 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCL13Q99616 AC142381.4-202ENST00000563973 229 ntBASIC16.4■□□□□ 0.22
CCL13Q99616 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.4■□□□□ 0.22
CCL13Q99616 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.4■□□□□ 0.22
CCL13Q99616 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCL13Q99616 AC124016.1-201ENST00000609552 612 ntBASIC16.4■□□□□ 0.22
CCL13Q99616 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCL13Q99616 FAM197Y4-202ENST00000622692 608 ntBASIC16.4■□□□□ 0.22
CCL13Q99616 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CCL13Q99616 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.4■□□□□ 0.22
CCL13Q99616 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL13Q99616 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCL13Q99616 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCL13Q99616 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL13Q99616 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.4■□□□□ 0.22
CCL13Q99616 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCL13Q99616 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCL13Q99616 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.4■□□□□ 0.22
CCL13Q99616 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL13Q99616 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCL13Q99616 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCL13Q99616 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCL13Q99616 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL13Q99616 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL13Q99616 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CCL13Q99616 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL13Q99616 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.39■□□□□ 0.21
CCL13Q99616 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL13Q99616 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCL13Q99616 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL13Q99616 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CCL13Q99616 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL13Q99616 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CCL13Q99616 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.39■□□□□ 0.21
CCL13Q99616 AL359736.2-201ENST00000621992 437 ntBASIC16.39■□□□□ 0.21
CCL13Q99616 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCL13Q99616 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.39■□□□□ 0.21
CCL13Q99616 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL13Q99616 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL13Q99616 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CCL13Q99616 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL13Q99616 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CCL13Q99616 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCL13Q99616 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.38■□□□□ 0.21
CCL13Q99616 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms