Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 AC099791.1-201ENST00000416440 715 ntBASIC14.76□□□□□ -0.05
AP1S3Q96PC3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 AC120498.10-201ENST00000621827 505 ntBASIC14.76□□□□□ -0.05
AP1S3Q96PC3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.76□□□□□ -0.05
AP1S3Q96PC3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S3Q96PC3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 MIR572-201ENST00000384983 95 ntBASIC14.74□□□□□ -0.05
AP1S3Q96PC3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.74□□□□□ -0.05
AP1S3Q96PC3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms