Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 BX664615.1-201ENST00000443558 458 ntBASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 AC097488.1-201ENST00000507834 756 ntBASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 AC011506.1-201ENST00000474329 610 ntBASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC46A1Q96NT5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 AK4P3-201ENST00000418260 669 ntBASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 CRYGFP-201ENST00000418459 633 ntBASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC46A1Q96NT5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 LINC01238-205ENST00000567549 1107 ntBASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 AC131212.4-201ENST00000623606 975 ntBASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 DPP3P2-201ENST00000416030 1696 ntBASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC46A1Q96NT5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 AC004980.1-204ENST00000429707 299 ntBASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC46A1Q96NT5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.71■□□□□ 0.58
SLC46A1Q96NT5 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC46A1Q96NT5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms