Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM11Q96F44 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.71■□□□□ 0.91
TRIM11Q96F44 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM11Q96F44 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM11Q96F44 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRIM11Q96F44 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM11Q96F44 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRIM11Q96F44 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TRIM11Q96F44 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM11Q96F44 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM11Q96F44 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.7■□□□□ 0.9
TRIM11Q96F44 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRIM11Q96F44 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.7■□□□□ 0.9
TRIM11Q96F44 AL138781.1-201ENST00000566567 1274 ntBASIC20.7■□□□□ 0.9
TRIM11Q96F44 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.7■□□□□ 0.9
TRIM11Q96F44 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM11Q96F44 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRIM11Q96F44 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM11Q96F44 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRIM11Q96F44 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
TRIM11Q96F44 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM11Q96F44 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM11Q96F44 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRIM11Q96F44 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM11Q96F44 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM11Q96F44 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM11Q96F44 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM11Q96F44 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM11Q96F44 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM11Q96F44 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 PNMA6B-201ENST00000538162 1200 ntBASIC20.69■□□□□ 0.9
TRIM11Q96F44 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.69■□□□□ 0.9
TRIM11Q96F44 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM11Q96F44 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM11Q96F44 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM11Q96F44 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM11Q96F44 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRIM11Q96F44 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM11Q96F44 AL032819.2-201ENST00000624543 2162 ntBASIC20.68■□□□□ 0.9
TRIM11Q96F44 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TRIM11Q96F44 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM11Q96F44 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRIM11Q96F44 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM11Q96F44 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM11Q96F44 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
TRIM11Q96F44 AL109923.1-201ENST00000618799 583 ntBASIC20.68■□□□□ 0.9
TRIM11Q96F44 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.68■□□□□ 0.9
TRIM11Q96F44 AC133041.1-202ENST00000642053 222 ntBASIC20.68■□□□□ 0.9
TRIM11Q96F44 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM11Q96F44 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM11Q96F44 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM11Q96F44 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM11Q96F44 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRIM11Q96F44 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM11Q96F44 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.67■□□□□ 0.9
TRIM11Q96F44 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.67■□□□□ 0.9
TRIM11Q96F44 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.67■□□□□ 0.9
TRIM11Q96F44 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM11Q96F44 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.67■□□□□ 0.9
TRIM11Q96F44 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms