Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 AC068338.2-201ENST00000563278 1430 ntBASIC18.8■□□□□ 0.6
VPS33AQ96AX1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 LINC01465-201ENST00000408887 1940 ntBASIC18.8■□□□□ 0.6
VPS33AQ96AX1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 PHGDH-210ENST00000641115 1638 ntBASIC18.79■□□□□ 0.6
VPS33AQ96AX1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 CNN2P6-201ENST00000439038 900 ntBASIC18.79■□□□□ 0.6
VPS33AQ96AX1 AC034268.1-201ENST00000441047 882 ntBASIC18.79■□□□□ 0.6
VPS33AQ96AX1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS33AQ96AX1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 HLA-G-202ENST00000376815 851 ntBASIC18.78■□□□□ 0.6
VPS33AQ96AX1 HLA-G-203ENST00000376818 1127 ntBASIC18.78■□□□□ 0.6
VPS33AQ96AX1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 KRT18P11-201ENST00000435214 1283 ntBASIC18.78■□□□□ 0.6
VPS33AQ96AX1 AC137761.2-201ENST00000561729 223 ntBASIC18.78■□□□□ 0.6
VPS33AQ96AX1 AC145350.3-201ENST00000569033 163 ntBASIC18.78■□□□□ 0.6
VPS33AQ96AX1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS33AQ96AX1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 NEFHP1-201ENST00000412845 2629 ntBASIC18.77■□□□□ 0.6
VPS33AQ96AX1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 AL355472.2-201ENST00000422958 438 ntBASIC18.77■□□□□ 0.6
VPS33AQ96AX1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 AC087623.3-201ENST00000607047 1098 ntBASIC18.77■□□□□ 0.6
VPS33AQ96AX1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
VPS33AQ96AX1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS33AQ96AX1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS33AQ96AX1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VPS33AQ96AX1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
VPS33AQ96AX1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms