Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.46■□□□□ 0.23
RTN4IP1Q8WWV3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RTN4IP1Q8WWV3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RTN4IP1Q8WWV3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
RTN4IP1Q8WWV3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 MIR663A-201ENST00000385250 93 ntBASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 AL512625.2-201ENST00000417533 625 ntBASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 AC133552.2-202ENST00000575694 574 ntBASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 AC010980.2-201ENST00000587099 1412 ntBASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTN4IP1Q8WWV3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 AL032819.2-201ENST00000624543 2162 ntBASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 AC090340.1-201ENST00000620778 4980 ntBASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 CYP2T3P-201ENST00000601990 817 ntBASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms