Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM4Q8WVI0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM4Q8WVI0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 AC087633.2-202ENST00000565166 1439 ntBASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 AC068880.1-201ENST00000507289 2297 ntBASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 AC097381.1-201ENST00000429019 1296 ntBASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 AC105265.2-201ENST00000467189 838 ntBASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 SLC7A5P2-201ENST00000553010 536 ntBASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 AIRN-201ENST00000601203 4374 ntBASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM4Q8WVI0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 AC099791.1-201ENST00000416440 715 ntBASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 AC008764.7-201ENST00000593779 1081 ntBASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM4Q8WVI0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 TEX21P-204ENST00000641479 1693 ntBASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 AC131281.2-201ENST00000520478 145 ntBASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM4Q8WVI0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms