Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1BQ8WUY9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 DPP3P2-201ENST00000416030 1696 ntBASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 AC073195.1-201ENST00000607241 877 ntBASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 AC004264.1-201ENST00000608354 794 ntBASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 AL353708.3-201ENST00000610272 989 ntBASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1BQ8WUY9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 AC112907.3-201ENST00000577781 2400 ntBASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
DEPDC1BQ8WUY9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 MMP23A-201ENST00000234610 1017 ntBASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 AC124283.5-201ENST00000624661 1809 ntBASIC20.73■□□□□ 0.91
DEPDC1BQ8WUY9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 RCN1P1-201ENST00000400413 996 ntBASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DEPDC1BQ8WUY9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms