Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF169Q8NCN4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.32■■□□□ 1
RNF169Q8NCN4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF169Q8NCN4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF169Q8NCN4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.32■■□□□ 1
RNF169Q8NCN4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RNF169Q8NCN4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF169Q8NCN4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF169Q8NCN4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RNF169Q8NCN4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.31■■□□□ 1
RNF169Q8NCN4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.31■■□□□ 1
RNF169Q8NCN4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF169Q8NCN4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.31■■□□□ 1
RNF169Q8NCN4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.31■■□□□ 1
RNF169Q8NCN4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.31■■□□□ 1
RNF169Q8NCN4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.31■■□□□ 1
RNF169Q8NCN4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.31■■□□□ 1
RNF169Q8NCN4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.31■■□□□ 1
RNF169Q8NCN4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF169Q8NCN4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF169Q8NCN4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 FSCN1P1-201ENST00000568912 1481 ntBASIC21.31■■□□□ 1
RNF169Q8NCN4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF169Q8NCN4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF169Q8NCN4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RNF169Q8NCN4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF169Q8NCN4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.3■■□□□ 1
RNF169Q8NCN4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF169Q8NCN4 AC005521.1-201ENST00000393351 872 ntBASIC21.3■■□□□ 1
RNF169Q8NCN4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.3■■□□□ 1
RNF169Q8NCN4 KRT18P57-201ENST00000443599 1254 ntBASIC21.3■■□□□ 1
RNF169Q8NCN4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
RNF169Q8NCN4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.3■■□□□ 1
RNF169Q8NCN4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.3■■□□□ 1
RNF169Q8NCN4 AC010947.1-201ENST00000623454 693 ntBASIC21.3■■□□□ 1
RNF169Q8NCN4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF169Q8NCN4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF169Q8NCN4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.3■■□□□ 1
RNF169Q8NCN4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF169Q8NCN4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RNF169Q8NCN4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF169Q8NCN4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.29■■□□□ 1
RNF169Q8NCN4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RNF169Q8NCN4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.29■■□□□ 1
RNF169Q8NCN4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.29■■□□□ 1
RNF169Q8NCN4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.29■■□□□ 1
RNF169Q8NCN4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.29■■□□□ 1
RNF169Q8NCN4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.29■■□□□ 1
RNF169Q8NCN4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.29■■□□□ 1
RNF169Q8NCN4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.29■■□□□ 1
RNF169Q8NCN4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 AC131212.4-201ENST00000623606 975 ntBASIC21.29■■□□□ 1
RNF169Q8NCN4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.29■■□□□ 1
RNF169Q8NCN4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF169Q8NCN4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.29■■□□□ 1
RNF169Q8NCN4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RNF169Q8NCN4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF169Q8NCN4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF169Q8NCN4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RNF169Q8NCN4 MESTP1-201ENST00000404287 994 ntBASIC21.28■■□□□ 1
RNF169Q8NCN4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF169Q8NCN4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.28■■□□□ 1
RNF169Q8NCN4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.28■■□□□ 1
RNF169Q8NCN4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF169Q8NCN4 B3GAT3P1-201ENST00000471720 806 ntBASIC21.28■■□□□ 1
RNF169Q8NCN4 AC011506.1-201ENST00000474329 610 ntBASIC21.28■■□□□ 1
RNF169Q8NCN4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.28■■□□□ 1
RNF169Q8NCN4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.28■■□□□ 1
RNF169Q8NCN4 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.28■■□□□ 1
RNF169Q8NCN4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RNF169Q8NCN4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.28■■□□□ 1
RNF169Q8NCN4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF169Q8NCN4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RNF169Q8NCN4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RNF169Q8NCN4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF169Q8NCN4 KRT18P22-201ENST00000402024 1347 ntBASIC21.28■■□□□ 1
RNF169Q8NCN4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.28■■□□□ 1
RNF169Q8NCN4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF169Q8NCN4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.27■■□□□ 1
RNF169Q8NCN4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.27■■□□□ 1
RNF169Q8NCN4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms