Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC170Q8IYT3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC170Q8IYT3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC170Q8IYT3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC170Q8IYT3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC170Q8IYT3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC170Q8IYT3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC170Q8IYT3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.02■□□□□ 0.96
CCDC170Q8IYT3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC170Q8IYT3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC170Q8IYT3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC170Q8IYT3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
CCDC170Q8IYT3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC170Q8IYT3 AL161938.1-201ENST00000569833 2180 ntBASIC21.02■□□□□ 0.95
CCDC170Q8IYT3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 AC018553.1-201ENST00000616682 1458 ntBASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 AC008694.1-202ENST00000636953 945 ntBASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 AC116351.2-201ENST00000606540 1585 ntBASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC170Q8IYT3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 AC141586.3-201ENST00000562166 1838 ntBASIC21■□□□□ 0.95
CCDC170Q8IYT3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 CYP2T1P-201ENST00000432607 1285 ntBASIC21■□□□□ 0.95
CCDC170Q8IYT3 HES2-205ENST00000487437 968 ntTSL 3 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21■□□□□ 0.95
CCDC170Q8IYT3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC170Q8IYT3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 NEFHP1-201ENST00000412845 2629 ntBASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC170Q8IYT3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC170Q8IYT3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC170Q8IYT3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC170Q8IYT3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC170Q8IYT3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC170Q8IYT3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC170Q8IYT3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC170Q8IYT3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms