Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NCF1B-203ENST00000435988 1254 ntBASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 NEFHP1-201ENST00000412845 2629 ntBASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 CDV3P1-201ENST00000471403 739 ntBASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 AC104771.1-201ENST00000603335 964 ntBASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 AC005181.1-201ENST00000604782 1256 ntBASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 AL050303.2-201ENST00000619798 666 ntBASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CRLF3Q8IUI8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CRLF3Q8IUI8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CRLF3Q8IUI8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
CRLF3Q8IUI8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CRLF3Q8IUI8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 CNN2P6-201ENST00000439038 900 ntBASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 SLC7A5P1-201ENST00000568957 537 ntBASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 AL356652.1-201ENST00000615962 565 ntBASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 AL109923.1-201ENST00000618799 583 ntBASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CRLF3Q8IUI8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRLF3Q8IUI8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CRLF3Q8IUI8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms