Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL23A1Q86Y22 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL23A1Q86Y22 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC24.71■■□□□ 1.55
COL23A1Q86Y22 KRT8P10-201ENST00000450021 1447 ntBASIC24.7■■□□□ 1.55
COL23A1Q86Y22 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.7■■□□□ 1.55
COL23A1Q86Y22 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.7■■□□□ 1.55
COL23A1Q86Y22 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
COL23A1Q86Y22 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.7■■□□□ 1.55
COL23A1Q86Y22 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 KRT17P6-201ENST00000453795 1220 ntBASIC24.7■■□□□ 1.54
COL23A1Q86Y22 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 GPALPP1-207ENST00000611650 899 ntBASIC24.7■■□□□ 1.54
COL23A1Q86Y22 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
COL23A1Q86Y22 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 PHGDH-210ENST00000641115 1638 ntBASIC24.69■■□□□ 1.54
COL23A1Q86Y22 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 SPDYE15P-201ENST00000424157 909 ntBASIC24.69■■□□□ 1.54
COL23A1Q86Y22 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 PRELID1P1-202ENST00000567272 903 ntBASIC24.69■■□□□ 1.54
COL23A1Q86Y22 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL23A1Q86Y22 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC24.68■■□□□ 1.54
COL23A1Q86Y22 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL23A1Q86Y22 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC24.67■■□□□ 1.54
COL23A1Q86Y22 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL23A1Q86Y22 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.67■■□□□ 1.54
COL23A1Q86Y22 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
COL23A1Q86Y22 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL23A1Q86Y22 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.67■■□□□ 1.54
COL23A1Q86Y22 CKBP1-201ENST00000565489 1086 ntBASIC24.67■■□□□ 1.54
COL23A1Q86Y22 AC006538.3-201ENST00000612495 578 ntBASIC24.67■■□□□ 1.54
COL23A1Q86Y22 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL23A1Q86Y22 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
COL23A1Q86Y22 TMEM179-206ENST00000616017 1645 ntBASIC24.67■■□□□ 1.54
COL23A1Q86Y22 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL23A1Q86Y22 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 AC004870.1-201ENST00000315132 882 ntBASIC24.66■■□□□ 1.54
COL23A1Q86Y22 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 AC092329.2-201ENST00000598402 547 ntBASIC24.66■■□□□ 1.54
COL23A1Q86Y22 AC023511.2-201ENST00000618803 211 ntBASIC24.66■■□□□ 1.54
COL23A1Q86Y22 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL23A1Q86Y22 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 AC004263.2-201ENST00000617183 678 ntBASIC24.65■■□□□ 1.54
COL23A1Q86Y22 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL23A1Q86Y22 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.64■■□□□ 1.54
COL23A1Q86Y22 PLK5-205ENST00000642079 1969 ntBASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms