Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00336Q6ZUF6 C1QL1P1-201ENST00000568105 661 ntBASIC13.16□□□□□ -0.3
LINC00336Q6ZUF6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00336Q6ZUF6 AL121894.2-201ENST00000602977 491 ntBASIC13.16□□□□□ -0.3
LINC00336Q6ZUF6 FAM87A-204ENST00000613235 858 ntBASIC13.16□□□□□ -0.3
LINC00336Q6ZUF6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00336Q6ZUF6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 AC026310.3-201ENST00000625186 2373 ntBASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 TSPY5P-201ENST00000426936 936 ntBASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 AC091390.4-202ENST00000476426 537 ntBASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 COX11P1-201ENST00000489116 835 ntBASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 AC106820.2-201ENST00000563775 3264 ntBASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
LINC00336Q6ZUF6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.15□□□□□ -0.31
LINC00336Q6ZUF6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00336Q6ZUF6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 KRT8P36-201ENST00000489121 1440 ntBASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 MESTP1-201ENST00000404287 994 ntBASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 HOMER2P1-201ENST00000455653 964 ntBASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00336Q6ZUF6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 AC011484.1-201ENST00000377652 1995 ntBASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 IER3-202ENST00000376377 1350 ntBASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 PCED1CP-201ENST00000419887 785 ntBASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 SLC25A1P2-201ENST00000430693 912 ntBASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 YBX1P2-201ENST00000489612 999 ntBASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 AC139887.4-201ENST00000607877 719 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms