Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDHR3Q6ZTQ4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDHR3Q6ZTQ4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 AL031963.3-201ENST00000606441 850 ntBASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 AL589743.5-201ENST00000616611 1050 ntBASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CDHR3Q6ZTQ4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
CDHR3Q6ZTQ4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDHR3Q6ZTQ4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 AP001271.2-201ENST00000624018 1556 ntBASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 KRT16P6-202ENST00000425692 1426 ntBASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 ABHD17AP1-201ENST00000358206 933 ntBASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 RNA5SP413-201ENST00000516373 109 ntBASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 MIR4651-201ENST00000582622 73 ntBASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.63■□□□□ 0.73
CDHR3Q6ZTQ4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 TSPY20P-201ENST00000450910 630 ntBASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDHR3Q6ZTQ4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms