Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CASC1Q6TDU7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.92■■□□□ 1.42
CASC1Q6TDU7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.92■■□□□ 1.42
CASC1Q6TDU7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CASC1Q6TDU7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CASC1Q6TDU7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CASC1Q6TDU7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CASC1Q6TDU7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 SLC29A4P1-201ENST00000398760 971 ntBASIC23.91■■□□□ 1.42
CASC1Q6TDU7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CASC1Q6TDU7 AC116351.2-201ENST00000606540 1585 ntBASIC23.91■■□□□ 1.42
CASC1Q6TDU7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CASC1Q6TDU7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CASC1Q6TDU7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CASC1Q6TDU7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.89■■□□□ 1.42
CASC1Q6TDU7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC23.89■■□□□ 1.42
CASC1Q6TDU7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.89■■□□□ 1.42
CASC1Q6TDU7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 TSPY6P-201ENST00000448518 926 ntBASIC23.89■■□□□ 1.41
CASC1Q6TDU7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CASC1Q6TDU7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 MIPEPP3-201ENST00000412105 444 ntBASIC23.88■■□□□ 1.41
CASC1Q6TDU7 GUSBP6-202ENST00000438529 1198 ntBASIC23.88■■□□□ 1.41
CASC1Q6TDU7 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CASC1Q6TDU7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 AC073210.2-201ENST00000430369 194 ntBASIC23.87■■□□□ 1.41
CASC1Q6TDU7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 AL109923.1-201ENST00000618799 583 ntBASIC23.87■■□□□ 1.41
CASC1Q6TDU7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CASC1Q6TDU7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.86■■□□□ 1.41
CASC1Q6TDU7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.86■■□□□ 1.41
CASC1Q6TDU7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CASC1Q6TDU7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CASC1Q6TDU7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms