Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PHGDH-210ENST00000641115 1638 ntBASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFWD3Q6PCD5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFWD3Q6PCD5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 AL596275.1-201ENST00000423464 877 ntBASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.4■□□□□ 0.86
RFWD3Q6PCD5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
RFWD3Q6PCD5 TFP1-202ENST00000475455 1573 ntBASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 AL691432.2-201ENST00000607222 2038 ntBASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RFWD3Q6PCD5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFWD3Q6PCD5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms