Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 AC083880.1-201ENST00000608266 535 ntBASIC17.81■□□□□ 0.44
NIPAL3Q6P499 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 KRT8P20-201ENST00000423953 1409 ntBASIC17.81■□□□□ 0.44
NIPAL3Q6P499 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 KRT8P17-201ENST00000453110 1448 ntBASIC17.81■□□□□ 0.44
NIPAL3Q6P499 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 HLA-G-202ENST00000376815 851 ntBASIC17.8■□□□□ 0.44
NIPAL3Q6P499 HLA-G-203ENST00000376818 1127 ntBASIC17.8■□□□□ 0.44
NIPAL3Q6P499 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 AL031963.3-201ENST00000606441 850 ntBASIC17.8■□□□□ 0.44
NIPAL3Q6P499 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.8■□□□□ 0.44
NIPAL3Q6P499 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NIPAL3Q6P499 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.78■□□□□ 0.44
NIPAL3Q6P499 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 AL390719.1-204ENST00000412397 1219 ntBASIC17.78■□□□□ 0.44
NIPAL3Q6P499 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 AC023632.3-201ENST00000521633 145 ntBASIC17.78■□□□□ 0.44
NIPAL3Q6P499 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms