Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LPCAT4Q643R3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LPCAT4Q643R3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 GUSBP5-201ENST00000418136 578 ntBASIC18.43■□□□□ 0.54
LPCAT4Q643R3 AIRN-201ENST00000601203 4374 ntBASIC18.43■□□□□ 0.54
LPCAT4Q643R3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LPCAT4Q643R3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 FP475955.4-201ENST00000623131 1990 ntBASIC18.42■□□□□ 0.54
LPCAT4Q643R3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT4Q643R3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT4Q643R3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms