Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.73■□□□□ 0.91
ERCC6LQ2NKX8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC6LQ2NKX8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 DUX4L19-201ENST00000557448 1267 ntBASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC6LQ2NKX8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ERCC6LQ2NKX8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 AC131281.2-201ENST00000520478 145 ntBASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ERCC6LQ2NKX8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 FP475955.4-201ENST00000623131 1990 ntBASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 KRT16P2-201ENST00000414673 1423 ntBASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ERCC6LQ2NKX8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms