Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 DUSP5P2-201ENST00000426873 1033 ntBASIC12.95□□□□□ -0.34
SYCNQ0VAF6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.95□□□□□ -0.34
SYCNQ0VAF6 AC092118.2-201ENST00000613495 667 ntBASIC12.95□□□□□ -0.34
SYCNQ0VAF6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 AC125437.2-201ENST00000625180 2167 ntBASIC12.95□□□□□ -0.34
SYCNQ0VAF6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 AL158211.5-201ENST00000623583 2518 ntBASIC12.95□□□□□ -0.34
SYCNQ0VAF6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SYCNQ0VAF6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SYCNQ0VAF6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 NCF1B-203ENST00000435988 1254 ntBASIC12.93□□□□□ -0.34
SYCNQ0VAF6 TSPY6P-201ENST00000448518 926 ntBASIC12.93□□□□□ -0.34
SYCNQ0VAF6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.93□□□□□ -0.34
SYCNQ0VAF6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms