Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP4Q07065 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.67■□□□□ 0.9
CKAP4Q07065 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP4Q07065 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP4Q07065 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CKAP4Q07065 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.67■□□□□ 0.9
CKAP4Q07065 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CKAP4Q07065 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.67■□□□□ 0.9
CKAP4Q07065 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CKAP4Q07065 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP4Q07065 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CKAP4Q07065 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.67■□□□□ 0.9
CKAP4Q07065 AC009113.1-201ENST00000570267 2443 ntBASIC20.67■□□□□ 0.9
CKAP4Q07065 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.67■□□□□ 0.9
CKAP4Q07065 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP4Q07065 AL390961.4-201ENST00000623958 2535 ntBASIC20.67■□□□□ 0.9
CKAP4Q07065 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.67■□□□□ 0.9
CKAP4Q07065 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP4Q07065 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP4Q07065 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP4Q07065 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CKAP4Q07065 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 AC006333.2-201ENST00000607957 2099 ntBASIC20.66■□□□□ 0.9
CKAP4Q07065 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CKAP4Q07065 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CKAP4Q07065 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CKAP4Q07065 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.66■□□□□ 0.9
CKAP4Q07065 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.66■□□□□ 0.9
CKAP4Q07065 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.66■□□□□ 0.9
CKAP4Q07065 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.66■□□□□ 0.9
CKAP4Q07065 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CKAP4Q07065 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CKAP4Q07065 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.66■□□□□ 0.9
CKAP4Q07065 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKAP4Q07065 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CKAP4Q07065 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CKAP4Q07065 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.65■□□□□ 0.9
CKAP4Q07065 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CKAP4Q07065 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CKAP4Q07065 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.65■□□□□ 0.9
CKAP4Q07065 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.65■□□□□ 0.9
CKAP4Q07065 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.65■□□□□ 0.9
CKAP4Q07065 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.65■□□□□ 0.9
CKAP4Q07065 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CKAP4Q07065 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 AC104581.1-202ENST00000635932 2618 ntBASIC20.65■□□□□ 0.9
CKAP4Q07065 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CKAP4Q07065 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CKAP4Q07065 AC135050.7-201ENST00000624508 2218 ntBASIC20.65■□□□□ 0.9
CKAP4Q07065 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP4Q07065 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.65■□□□□ 0.9
CKAP4Q07065 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CKAP4Q07065 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CKAP4Q07065 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CKAP4Q07065 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.64■□□□□ 0.9
CKAP4Q07065 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CKAP4Q07065 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.64■□□□□ 0.9
CKAP4Q07065 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.64■□□□□ 0.9
CKAP4Q07065 CYP21A1P-202ENST00000354927 1481 ntBASIC20.64■□□□□ 0.89
CKAP4Q07065 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.64■□□□□ 0.89
CKAP4Q07065 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.64■□□□□ 0.89
CKAP4Q07065 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CKAP4Q07065 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CKAP4Q07065 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CKAP4Q07065 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.64■□□□□ 0.89
CKAP4Q07065 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.64■□□□□ 0.89
CKAP4Q07065 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.64■□□□□ 0.89
CKAP4Q07065 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.64■□□□□ 0.89
CKAP4Q07065 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.64■□□□□ 0.89
CKAP4Q07065 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CKAP4Q07065 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.64■□□□□ 0.89
CKAP4Q07065 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CKAP4Q07065 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CKAP4Q07065 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CKAP4Q07065 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CKAP4Q07065 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.64■□□□□ 0.89
CKAP4Q07065 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CKAP4Q07065 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms