Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKL1Q00532 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.26■□□□□ 0.67
CDKL1Q00532 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.26■□□□□ 0.67
CDKL1Q00532 AC069152.1-201ENST00000438030 544 ntBASIC19.26■□□□□ 0.67
CDKL1Q00532 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 AC060766.5-201ENST00000590539 871 ntBASIC19.26■□□□□ 0.67
CDKL1Q00532 AC104771.1-201ENST00000603335 964 ntBASIC19.26■□□□□ 0.67
CDKL1Q00532 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CDKL1Q00532 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CDKL1Q00532 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKL1Q00532 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.25■□□□□ 0.67
CDKL1Q00532 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL1Q00532 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL1Q00532 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL1Q00532 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL1Q00532 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL1Q00532 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL1Q00532 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKL1Q00532 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL1Q00532 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL1Q00532 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL1Q00532 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL1Q00532 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL1Q00532 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.25■□□□□ 0.67
CDKL1Q00532 AC083880.1-201ENST00000608266 535 ntBASIC19.25■□□□□ 0.67
CDKL1Q00532 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKL1Q00532 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKL1Q00532 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKL1Q00532 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDKL1Q00532 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKL1Q00532 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKL1Q00532 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDKL1Q00532 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKL1Q00532 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 AC018553.1-201ENST00000616682 1458 ntBASIC19.24■□□□□ 0.67
CDKL1Q00532 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDKL1Q00532 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKL1Q00532 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDKL1Q00532 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKL1Q00532 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKL1Q00532 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.24■□□□□ 0.67
CDKL1Q00532 AC098934.4-201ENST00000564127 592 ntBASIC19.24■□□□□ 0.67
CDKL1Q00532 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL1Q00532 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKL1Q00532 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL1Q00532 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDKL1Q00532 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDKL1Q00532 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDKL1Q00532 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL1Q00532 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CDKL1Q00532 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDKL1Q00532 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.23■□□□□ 0.67
CDKL1Q00532 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKL1Q00532 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.23■□□□□ 0.67
CDKL1Q00532 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDKL1Q00532 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 NEFHP1-201ENST00000412845 2629 ntBASIC19.23■□□□□ 0.67
CDKL1Q00532 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL1Q00532 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL1Q00532 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL1Q00532 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL1Q00532 AC092368.3-202ENST00000574180 1591 ntBASIC19.23■□□□□ 0.67
CDKL1Q00532 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL1Q00532 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL1Q00532 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDKL1Q00532 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CDKL1Q00532 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDKL1Q00532 LETM1P2-201ENST00000597330 2178 ntBASIC19.22■□□□□ 0.67
CDKL1Q00532 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL1Q00532 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKL1Q00532 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL1Q00532 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL1Q00532 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL1Q00532 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms