Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPM4P67936 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPM4P67936 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPM4P67936 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.92■■□□□ 1.1
TPM4P67936 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
TPM4P67936 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.92■■□□□ 1.1
TPM4P67936 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM4P67936 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM4P67936 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM4P67936 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TPM4P67936 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM4P67936 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.92■■□□□ 1.1
TPM4P67936 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.92■■□□□ 1.1
TPM4P67936 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.92■■□□□ 1.1
TPM4P67936 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM4P67936 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
TPM4P67936 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM4P67936 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.92■■□□□ 1.1
TPM4P67936 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
TPM4P67936 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TPM4P67936 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM4P67936 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM4P67936 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.92■■□□□ 1.1
TPM4P67936 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
TPM4P67936 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
TPM4P67936 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.91■■□□□ 1.1
TPM4P67936 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.91■■□□□ 1.1
TPM4P67936 TERF1P5-201ENST00000477545 1207 ntBASIC21.91■■□□□ 1.1
TPM4P67936 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.91■■□□□ 1.1
TPM4P67936 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.91■■□□□ 1.1
TPM4P67936 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.91■■□□□ 1.1
TPM4P67936 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.91■■□□□ 1.1
TPM4P67936 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TPM4P67936 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.91■■□□□ 1.1
TPM4P67936 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM4P67936 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.9■■□□□ 1.1
TPM4P67936 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
TPM4P67936 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.9■■□□□ 1.1
TPM4P67936 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.9■■□□□ 1.1
TPM4P67936 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TPM4P67936 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
TPM4P67936 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TPM4P67936 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.9■■□□□ 1.1
TPM4P67936 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.9■■□□□ 1.1
TPM4P67936 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
TPM4P67936 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
TPM4P67936 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.89■■□□□ 1.1
TPM4P67936 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TPM4P67936 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
TPM4P67936 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TPM4P67936 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.89■■□□□ 1.1
TPM4P67936 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TPM4P67936 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM4P67936 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM4P67936 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
TPM4P67936 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.89■■□□□ 1.09
TPM4P67936 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM4P67936 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.89■■□□□ 1.09
TPM4P67936 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.89■■□□□ 1.09
TPM4P67936 AL162412.1-201ENST00000567129 965 ntBASIC21.89■■□□□ 1.09
TPM4P67936 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.89■■□□□ 1.09
TPM4P67936 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM4P67936 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.89■■□□□ 1.09
TPM4P67936 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM4P67936 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
TPM4P67936 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.89■■□□□ 1.09
TPM4P67936 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TPM4P67936 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM4P67936 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM4P67936 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM4P67936 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM4P67936 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TPM4P67936 HTR7P1-202ENST00000624664 4411 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms