Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL39P62891 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RPL39P62891 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
RPL39P62891 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPL39P62891 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RPL39P62891 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RPL39P62891 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RPL39P62891 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RPL39P62891 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.83□□□□□ -0.19
RPL39P62891 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.83□□□□□ -0.19
RPL39P62891 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
RPL39P62891 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPL39P62891 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPL39P62891 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RPL39P62891 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RPL39P62891 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
RPL39P62891 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RPL39P62891 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
RPL39P62891 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.83□□□□□ -0.2
RPL39P62891 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.83□□□□□ -0.2
RPL39P62891 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.83□□□□□ -0.2
RPL39P62891 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.83□□□□□ -0.2
RPL39P62891 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.83□□□□□ -0.2
RPL39P62891 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RPL39P62891 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
RPL39P62891 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.83□□□□□ -0.2
RPL39P62891 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
RPL39P62891 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.83□□□□□ -0.2
RPL39P62891 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.83□□□□□ -0.2
RPL39P62891 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RPL39P62891 AP001271.2-201ENST00000624018 1556 ntBASIC13.83□□□□□ -0.2
RPL39P62891 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL39P62891 PTBP1P-201ENST00000554374 1601 ntBASIC13.82□□□□□ -0.2
RPL39P62891 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 KRT16P6-202ENST00000425692 1426 ntBASIC13.82□□□□□ -0.2
RPL39P62891 KRT8P17-201ENST00000453110 1448 ntBASIC13.82□□□□□ -0.2
RPL39P62891 AC087633.2-202ENST00000565166 1439 ntBASIC13.82□□□□□ -0.2
RPL39P62891 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 AC009113.1-201ENST00000570267 2443 ntBASIC13.82□□□□□ -0.2
RPL39P62891 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 HTR7P1-202ENST00000624664 4411 ntBASIC13.82□□□□□ -0.2
RPL39P62891 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.82□□□□□ -0.2
RPL39P62891 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPL39P62891 AC097381.1-201ENST00000429019 1296 ntBASIC13.82□□□□□ -0.2
RPL39P62891 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 KRT18P20-201ENST00000548986 1279 ntBASIC13.82□□□□□ -0.2
RPL39P62891 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.82□□□□□ -0.2
RPL39P62891 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.82□□□□□ -0.2
RPL39P62891 AL136967.2-201ENST00000623968 743 ntBASIC13.82□□□□□ -0.2
RPL39P62891 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RPL39P62891 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPL39P62891 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.82□□□□□ -0.2
RPL39P62891 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms