Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.09■□□□□ 0.33
SEC61A1P61619 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.09■□□□□ 0.33
SEC61A1P61619 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SEC61A1P61619 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.09■□□□□ 0.33
SEC61A1P61619 TSPY20P-201ENST00000450910 630 ntBASIC17.09■□□□□ 0.33
SEC61A1P61619 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.09■□□□□ 0.33
SEC61A1P61619 AC091874.3-201ENST00000512672 1195 ntBASIC17.09■□□□□ 0.33
SEC61A1P61619 RNA5SP413-201ENST00000516373 109 ntBASIC17.09■□□□□ 0.33
SEC61A1P61619 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.09■□□□□ 0.33
SEC61A1P61619 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.09■□□□□ 0.33
SEC61A1P61619 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.09■□□□□ 0.33
SEC61A1P61619 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.09■□□□□ 0.33
SEC61A1P61619 MYC-209ENST00000641252 345 ntBASIC17.09■□□□□ 0.33
SEC61A1P61619 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 AC092720.2-201ENST00000602388 1665 ntBASIC17.09■□□□□ 0.33
SEC61A1P61619 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.09■□□□□ 0.33
SEC61A1P61619 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEC61A1P61619 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.08■□□□□ 0.33
SEC61A1P61619 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEC61A1P61619 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SEC61A1P61619 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.08■□□□□ 0.33
SEC61A1P61619 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.08■□□□□ 0.33
SEC61A1P61619 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEC61A1P61619 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEC61A1P61619 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.08■□□□□ 0.33
SEC61A1P61619 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61A1P61619 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61A1P61619 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61A1P61619 CYP21A1P-202ENST00000354927 1481 ntBASIC17.08■□□□□ 0.32
SEC61A1P61619 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
SEC61A1P61619 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.08■□□□□ 0.32
SEC61A1P61619 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
SEC61A1P61619 MCRIP2P1-201ENST00000394346 511 ntBASIC17.08■□□□□ 0.32
SEC61A1P61619 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.08■□□□□ 0.32
SEC61A1P61619 AC100791.3-201ENST00000617619 330 ntBASIC17.08■□□□□ 0.32
SEC61A1P61619 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.08■□□□□ 0.32
SEC61A1P61619 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.08■□□□□ 0.32
SEC61A1P61619 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SEC61A1P61619 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61A1P61619 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SEC61A1P61619 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61A1P61619 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61A1P61619 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61A1P61619 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.08■□□□□ 0.32
SEC61A1P61619 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.08■□□□□ 0.32
SEC61A1P61619 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61A1P61619 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61A1P61619 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61A1P61619 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SEC61A1P61619 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.07■□□□□ 0.32
SEC61A1P61619 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.07■□□□□ 0.32
SEC61A1P61619 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SEC61A1P61619 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.07■□□□□ 0.32
SEC61A1P61619 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SEC61A1P61619 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.07■□□□□ 0.32
SEC61A1P61619 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SEC61A1P61619 AC097658.1-201ENST00000475555 843 ntBASIC17.07■□□□□ 0.32
SEC61A1P61619 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.07■□□□□ 0.32
SEC61A1P61619 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.07■□□□□ 0.32
SEC61A1P61619 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.07■□□□□ 0.32
SEC61A1P61619 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SEC61A1P61619 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SEC61A1P61619 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.07■□□□□ 0.32
SEC61A1P61619 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEC61A1P61619 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.07■□□□□ 0.32
SEC61A1P61619 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SEC61A1P61619 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.06■□□□□ 0.32
SEC61A1P61619 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.06■□□□□ 0.32
SEC61A1P61619 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SEC61A1P61619 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.06■□□□□ 0.32
SEC61A1P61619 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SEC61A1P61619 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SEC61A1P61619 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SEC61A1P61619 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms