Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.95■□□□□ 0.46
CLDN20P56880 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN20P56880 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN20P56880 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLDN20P56880 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CLDN20P56880 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN20P56880 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN20P56880 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN20P56880 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLDN20P56880 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN20P56880 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CLDN20P56880 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN20P56880 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN20P56880 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLDN20P56880 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLDN20P56880 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CLDN20P56880 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN20P56880 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN20P56880 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
CLDN20P56880 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN20P56880 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN20P56880 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLDN20P56880 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN20P56880 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
CLDN20P56880 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN20P56880 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN20P56880 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN20P56880 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN20P56880 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN20P56880 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLDN20P56880 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN20P56880 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLDN20P56880 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 AC004408.2-201ENST00000623613 2777 ntBASIC17.93■□□□□ 0.46
CLDN20P56880 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN20P56880 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN20P56880 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN20P56880 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.92■□□□□ 0.46
CLDN20P56880 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLDN20P56880 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN20P56880 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
CLDN20P56880 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 RN7SL471P-201ENST00000580476 299 ntBASIC17.92■□□□□ 0.46
CLDN20P56880 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
CLDN20P56880 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN20P56880 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN20P56880 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN20P56880 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLDN20P56880 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
CLDN20P56880 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN20P56880 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN20P56880 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN20P56880 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN20P56880 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLDN20P56880 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN20P56880 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN20P56880 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms