Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 AC093458.2-201ENST00000623150 629 ntBASIC18.84■□□□□ 0.61
CLDN6P56747 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN6P56747 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN6P56747 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN6P56747 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN6P56747 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN6P56747 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN6P56747 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN6P56747 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN6P56747 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN6P56747 FAM8A6P-201ENST00000407496 1135 ntBASIC18.83■□□□□ 0.6
CLDN6P56747 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN6P56747 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN6P56747 TUBB8P6-201ENST00000436895 1288 ntBASIC18.83■□□□□ 0.6
CLDN6P56747 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN6P56747 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN6P56747 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN6P56747 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN6P56747 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN6P56747 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN6P56747 KRT126P-201ENST00000549467 1181 ntBASIC18.83■□□□□ 0.6
CLDN6P56747 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN6P56747 LINC01238-205ENST00000567549 1107 ntBASIC18.83■□□□□ 0.6
CLDN6P56747 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CLDN6P56747 AP000692.2-201ENST00000608391 879 ntBASIC18.83■□□□□ 0.6
CLDN6P56747 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN6P56747 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN6P56747 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLDN6P56747 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN6P56747 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN6P56747 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN6P56747 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN6P56747 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLDN6P56747 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN6P56747 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN6P56747 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLDN6P56747 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN6P56747 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN6P56747 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN6P56747 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN6P56747 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLDN6P56747 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.82■□□□□ 0.6
CLDN6P56747 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN6P56747 HLA-A-209ENST00000638375 975 ntBASIC18.82■□□□□ 0.6
CLDN6P56747 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN6P56747 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN6P56747 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN6P56747 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLDN6P56747 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN6P56747 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN6P56747 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLDN6P56747 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN6P56747 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN6P56747 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.82■□□□□ 0.6
CLDN6P56747 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CLDN6P56747 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN6P56747 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN6P56747 AC026310.3-201ENST00000625186 2373 ntBASIC18.82■□□□□ 0.6
CLDN6P56747 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLDN6P56747 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN6P56747 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN6P56747 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN6P56747 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN6P56747 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN6P56747 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN6P56747 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN6P56747 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN6P56747 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLDN6P56747 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
CLDN6P56747 TSPY5P-201ENST00000426936 936 ntBASIC18.81■□□□□ 0.6
CLDN6P56747 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN6P56747 YBX1P10-201ENST00000444752 975 ntBASIC18.81■□□□□ 0.6
CLDN6P56747 AC092647.4-201ENST00000457211 535 ntBASIC18.81■□□□□ 0.6
CLDN6P56747 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN6P56747 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLDN6P56747 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN6P56747 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN6P56747 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN6P56747 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN6P56747 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLDN6P56747 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN6P56747 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN6P56747 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN6P56747 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN6P56747 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN6P56747 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN6P56747 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN6P56747 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.8■□□□□ 0.6
CLDN6P56747 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms