Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 HTR7P1-201ENST00000538670 1336 ntBASIC21.49■■□□□ 1.03
NCKAP1LP55160 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKAP1LP55160 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKAP1LP55160 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKAP1LP55160 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCKAP1LP55160 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCKAP1LP55160 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKAP1LP55160 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKAP1LP55160 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKAP1LP55160 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.48■■□□□ 1.03
NCKAP1LP55160 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCKAP1LP55160 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCKAP1LP55160 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCKAP1LP55160 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCKAP1LP55160 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCKAP1LP55160 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCKAP1LP55160 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCKAP1LP55160 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NCKAP1LP55160 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCKAP1LP55160 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCKAP1LP55160 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCKAP1LP55160 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.46■■□□□ 1.03
NCKAP1LP55160 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCKAP1LP55160 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCKAP1LP55160 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NCKAP1LP55160 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NCKAP1LP55160 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NCKAP1LP55160 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.46■■□□□ 1.03
NCKAP1LP55160 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCKAP1LP55160 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
NCKAP1LP55160 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
NCKAP1LP55160 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1LP55160 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms