Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.95■■□□□ 1.42
PDE1AP54750 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.95■■□□□ 1.42
PDE1AP54750 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.95■■□□□ 1.42
PDE1AP54750 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.95■■□□□ 1.42
PDE1AP54750 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDE1AP54750 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDE1AP54750 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDE1AP54750 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
PDE1AP54750 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDE1AP54750 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDE1AP54750 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDE1AP54750 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PDE1AP54750 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDE1AP54750 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.94■■□□□ 1.42
PDE1AP54750 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.94■■□□□ 1.42
PDE1AP54750 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDE1AP54750 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.94■■□□□ 1.42
PDE1AP54750 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.94■■□□□ 1.42
PDE1AP54750 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDE1AP54750 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDE1AP54750 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.94■■□□□ 1.42
PDE1AP54750 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.94■■□□□ 1.42
PDE1AP54750 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDE1AP54750 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE1AP54750 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE1AP54750 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDE1AP54750 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PDE1AP54750 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
PDE1AP54750 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDE1AP54750 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDE1AP54750 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.93■■□□□ 1.42
PDE1AP54750 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE1AP54750 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDE1AP54750 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDE1AP54750 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE1AP54750 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE1AP54750 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.93■■□□□ 1.42
PDE1AP54750 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.93■■□□□ 1.42
PDE1AP54750 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE1AP54750 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE1AP54750 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE1AP54750 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE1AP54750 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PDE1AP54750 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE1AP54750 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PDE1AP54750 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PDE1AP54750 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE1AP54750 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE1AP54750 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PDE1AP54750 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.92■■□□□ 1.42
PDE1AP54750 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.92■■□□□ 1.42
PDE1AP54750 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.92■■□□□ 1.42
PDE1AP54750 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.92■■□□□ 1.42
PDE1AP54750 KRT18P16-201ENST00000510337 1294 ntBASIC23.92■■□□□ 1.42
PDE1AP54750 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.92■■□□□ 1.42
PDE1AP54750 AC069544.1-201ENST00000609399 999 ntBASIC23.92■■□□□ 1.42
PDE1AP54750 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
PDE1AP54750 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
PDE1AP54750 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PDE1AP54750 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE1AP54750 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.92■■□□□ 1.42
PDE1AP54750 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.92■■□□□ 1.42
PDE1AP54750 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PDE1AP54750 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDE1AP54750 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
PDE1AP54750 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE1AP54750 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE1AP54750 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE1AP54750 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE1AP54750 ESRRAP1-201ENST00000400596 1257 ntBASIC23.91■■□□□ 1.42
PDE1AP54750 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE1AP54750 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE1AP54750 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.91■■□□□ 1.42
PDE1AP54750 MTDHP1-201ENST00000605323 784 ntBASIC23.91■■□□□ 1.42
PDE1AP54750 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE1AP54750 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE1AP54750 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE1AP54750 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE1AP54750 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE1AP54750 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDE1AP54750 AL032819.2-201ENST00000624543 2162 ntBASIC23.91■■□□□ 1.42
PDE1AP54750 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE1AP54750 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PDE1AP54750 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.9■■□□□ 1.42
PDE1AP54750 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.9■■□□□ 1.42
PDE1AP54750 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.9■■□□□ 1.42
PDE1AP54750 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.9■■□□□ 1.42
PDE1AP54750 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.9■■□□□ 1.42
PDE1AP54750 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.9■■□□□ 1.42
PDE1AP54750 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDE1AP54750 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms