Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.15■□□□□ 0.98
PDE6CP51160 AC069544.1-201ENST00000609399 999 ntBASIC21.15■□□□□ 0.98
PDE6CP51160 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.15■□□□□ 0.98
PDE6CP51160 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.15■□□□□ 0.98
PDE6CP51160 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.15■□□□□ 0.98
PDE6CP51160 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6CP51160 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6CP51160 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6CP51160 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6CP51160 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDE6CP51160 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.14■□□□□ 0.98
PDE6CP51160 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDE6CP51160 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.14■□□□□ 0.98
PDE6CP51160 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.14■□□□□ 0.98
PDE6CP51160 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.14■□□□□ 0.97
PDE6CP51160 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.14■□□□□ 0.97
PDE6CP51160 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.14■□□□□ 0.97
PDE6CP51160 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.14■□□□□ 0.97
PDE6CP51160 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PDE6CP51160 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
PDE6CP51160 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.14■□□□□ 0.97
PDE6CP51160 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.14■□□□□ 0.97
PDE6CP51160 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6CP51160 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.14■□□□□ 0.97
PDE6CP51160 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PDE6CP51160 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
PDE6CP51160 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6CP51160 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6CP51160 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6CP51160 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PDE6CP51160 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.13■□□□□ 0.97
PDE6CP51160 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PDE6CP51160 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PDE6CP51160 RN7SL471P-201ENST00000580476 299 ntBASIC21.13■□□□□ 0.97
PDE6CP51160 FAM197Y4-202ENST00000622692 608 ntBASIC21.13■□□□□ 0.97
PDE6CP51160 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.13■□□□□ 0.97
PDE6CP51160 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6CP51160 TREX1-205ENST00000625293 1783 ntBASIC21.13■□□□□ 0.97
PDE6CP51160 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE6CP51160 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.12■□□□□ 0.97
PDE6CP51160 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
PDE6CP51160 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.12■□□□□ 0.97
PDE6CP51160 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.12■□□□□ 0.97
PDE6CP51160 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.12■□□□□ 0.97
PDE6CP51160 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.12■□□□□ 0.97
PDE6CP51160 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 AL359736.2-201ENST00000621992 437 ntBASIC21.12■□□□□ 0.97
PDE6CP51160 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6CP51160 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.12■□□□□ 0.97
PDE6CP51160 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PDE6CP51160 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.12■□□□□ 0.97
PDE6CP51160 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6CP51160 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
PDE6CP51160 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PDE6CP51160 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE6CP51160 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6CP51160 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE6CP51160 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6CP51160 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6CP51160 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6CP51160 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE6CP51160 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.11■□□□□ 0.97
PDE6CP51160 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6CP51160 C1QBPP2-201ENST00000528754 825 ntBASIC21.11■□□□□ 0.97
PDE6CP51160 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6CP51160 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6CP51160 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PDE6CP51160 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.11■□□□□ 0.97
PDE6CP51160 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6CP51160 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms